Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02767 ATGGCTTCTTCCAATCTCACCAACCTCACTATTCCTTCTTCAACTTCTCGTCCCCCCAATGATCCCAATCCATCTCCATCAATCACCAGCCCACAAATCATCTACAGTAGGTCCCACTCCTTCGTCGGCCCTTCCCCTCGCTTCCCTCCTCCTTCCGATAACAACTCTCTCTTCTTCCTCGAAGAACTCGCCTCCAACAGCGACGAAGAAGAAGAAGAAGAATACCAAATCGAACAACAACAACAACGCAAATTCGGACCCTCGGATTTCCAAATTCTCAAAGTTATTGGACAAGGTGCTTTTGGCAAAGTCTTCATGGTAAGAAGAAAAGGTACAGATGAAGATTCTTCCGATAACGGAATATTCGCGATGAAGGTTATGAGAAAAGACAACATAATTAAGAAAAATCATGTTGATTATATGAAAGCTGAAAGAGATATTCTCACTAAAGTTCTTCATCCTTTCATTGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATAAATGGTGGCCATCTCTTCTTTCAATTATGTCGACAGGGAATTTTTAGTGAGGATGAGGCAAGGATTTACACTGCTGAGATTGTATCTGCTGTTTCACATCTTCACACCAAAGGCATCGTGCATCGAGATCTTAAACCTGAAAACATACTTATGGATTCGGATGGCCATGTGATGCTAACGGATTTTGGAATGTCGAAAGAGATTGAGGAATCTGAGAGATCTAACTCTCTGTGTGGGACCACAGAATATATGGCACCGGAAATCCTTCTAGGTAAAGGCCATAACAAGGATGCAGATTGGTGGAGTGTTGGTGTTCTCTTGTATGAAATGATTACGGGAAAGGCACCATTTACACATACTAACAGAAAGAAGCTACAGGAGAAAATTATCAAAGAGAAAGTTAAACTTCCTCCATATCTTACCGGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAGTGGGGCAAATGGACATGAACAGATCAAAAACCATAAATGGTTTAGGACAATCAATTGGAACAAATTGGAAGCAAGAGAATTGCAGCCCAAGTTTAAACCAGCTGATGTGTCTGGAAAAGATTGCACAGCTAATTTTGATCGATGCTGGACAACGATGCCTCTTGAGGATTCACCAGCATCAACTCCTACAGGAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCAAATCCTTGGCTTTCTTCTAGGTAA 1266 0.4139 MASSNLTNLTIPSSTSRPPNDPNPSPSITSPQIIYSRSHSFVGPSPRFPPPSDNNSLFFLEELASNSDEEEEEEYQIEQQQQRKFGPSDFQILKVIGQGAFGKVFMVRRKGTDEDSSDNGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFQLCRQGIFSEDEARIYTAEIVSAVSHLHTKGIVHRDLKPENILMDSDGHVMLTDFGMSKEIEESERSNSLCGTTEYMAPEILLGKGHNKDADWWSVGVLLYEMITGKAPFTHTNRKKLQEKIIKEKVKLPPYLTGEAHSLLKGLLQKDPSTRLGSGANGHEQIKNHKWFRTINWNKLEARELQPKFKPADVSGKDCTANFDRCWTTMPLEDSPASTPTGGDHFQGYTYVAPNPWLSSR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02767 421 Gene3D Phosphorylase Kinase; domain 1 88 395 - -
Trre15g02767 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Trre15g02767 421 Pfam Protein kinase C terminal domain 374 411 IPR017892 GO:0004674|GO:0005524|GO:0006468
Trre15g02767 421 Pfam Protein kinase domain 90 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02767 421 Coils Coil 60 80 - -
Trre15g02767 421 MobiDBLite consensus disorder prediction 1 56 - -
Trre15g02767 421 FunFam Non-specific serine/threonine protein kinase 88 197 - -
Trre15g02767 421 MobiDBLite consensus disorder prediction 1 16 - -
Trre15g02767 421 Gene3D Transferase(Phosphotransferase) domain 1 176 371 - -
Trre15g02767 421 SUPERFAMILY Protein kinase-like (PK-like) 73 381 IPR011009 -
Trre15g02767 421 SMART pkinase_C_6 353 413 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre15g02767 421 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Trre15g02767 421 ProSiteProfiles Protein kinase domain profile. 90 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02767 421 FunFam Non-specific serine/threonine protein kinase 176 371 - -
Trre15g02767 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 353 421 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre15g02767 421 SMART serkin_6 90 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02767 421 PANTHER RIBOSOMAL PROTEIN S6 KINASE 66 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02767 Trre-Chr15 23572884 23575885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02767 31 414 AGC Kinase Gene Family AT3G08720 60.934 6.20e-178 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Trre15g02767 Pkinase 6.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02767 K04688 - gmx:100798259 637.876