Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02757 ATGGTTTCCAGTCTTCCTAAGTCTATCGGAAACATAACTTGCCCATATTTTTATGCAAGTTCGTGTGGAATTGTTGGTAATATTCCCTTAGAAGTTGGAAACATGAGCGAATTGTTACTTTTTGCTCTACATGATAATAATTTAAATGGACCAATACCTGGTACATTCAATGGATTACATAAACTTCAGCGATTGGACCTTAGCTACAATAGACTACAAGGATCATTTATTGAGGAGCTTTGTGAAACTAAGAGATTAGAATGGTTGAATCTTGGAAATAATAAAATTTCTGGAGTTTTACCAACATGTTTGGGAAATTTGACTTTTCTTCAAAATTTATACATAGGAAATAACCGTTTCAACTCTAGGATACCTTTTTCTCTTTGGAGTCTCACAGATATCTTAGAGATAGATTTGTACTCTAATGCAGTCATCGGCAATCTTCCACCTGAAATTGGGAATTTGAGAGCAATTACACTTTTGGATCTATCTAGAAATCAAATTTCAGGAAACATTCCTGCAACAATCAGTTCCTTAAAAACTTTGCAGAATCTCTCCTTAGCACATAACAAACTGATGGGATCAATTCCCAAATCACTTTATCAAATGGTAAGCCTGATGTCCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTTTCGTATAACAGATTACAAGGAGAGATTCCTGATGGTGGAGTTTTCAAAAAGTTGACGGCTCAATCTTTTATGCATAATGAAGCGCTTTGTGGCAATCCTCGCCTACATGTACCTCTGTGTGATAATCAAGTTAAGAGAAGTTTAATGGAAAAGTTGTTACTCAAATGCATAATTCCCATAGTTGTCTCAACCATTTTGATTGTTGCAAGCATCATAATTTTGAAAGGTAAGAAAAGGAAAAAGGTTGCAAATACTCTTGAAAGGGGTTTGTCAACTTTAGGTGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGACAATCTAAAACACATACAGAGACATTAGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAGTGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAACCAGCAGATGATATGTTTGTTGCAGGGCTAAGTTTGAAAACATGGATCAGTGGATCGTTGCCTAATTCTATTCTTGAGGTCTTGGATTCTAATTTAGTCCAACAATATGGGGAGCAAATTGATGAAATAGTTACATACATGTCAACTATTTTTGGTTTAGCCCTTAATTGTTGTGAATATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTGCTTCCCTAATCAAACTCAAGAATTTGGTTCTTAGCAGAAACATGGTCTAG 1452 0.3533 MVSSLPKSIGNITCPYFYASSCGIVGNIPLEVGNMSELLLFALHDNNLNGPIPGTFNGLHKLQRLDLSYNRLQGSFIEELCETKRLEWLNLGNNKISGVLPTCLGNLTFLQNLYIGNNRFNSRIPFSLWSLTDILEIDLYSNAVIGNLPPEIGNLRAITLLDLSRNQISGNIPATISSLKTLQNLSLAHNKLMGSIPKSLYQMVSLMSLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGVFKKLTAQSFMHNEALCGNPRLHVPLCDNQVKRSLMEKLLLKCIIPIVVSTILIVASIIILKGKKRKKVANTLERGLSTLGAPRRISYYELVQATNGFNERQSKTHTETLATIGYLAPEYGSSGIVSVKGDVYSYGIMLMEIFTRKKPADDMFVAGLSLKTWISGSLPNSILEVLDSNLVQQYGEQIDEIVTYMSTIFGLALNCCEYSPEARINMADVTASLIKLKNLVLSRNMV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02757 483 PRINTS Leucine-rich repeat signature 203 216 - -
Trre15g02757 483 PRINTS Leucine-rich repeat signature 62 75 - -
Trre15g02757 483 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515
Trre15g02757 483 Pfam Leucine Rich Repeat 85 107 IPR001611 GO:0005515
Trre15g02757 483 SUPERFAMILY L domain-like 19 268 - -
Trre15g02757 483 PANTHER OS04G0122200 PROTEIN 354 472 - -
Trre15g02757 483 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 57 148 - -
Trre15g02757 483 Pfam Protein tyrosine and serine/threonine kinase 347 469 IPR001245 GO:0004672|GO:0006468
Trre15g02757 483 Gene3D Transferase(Phosphotransferase) domain 1 320 480 - -
Trre15g02757 483 SMART LRR_typ_2 203 226 IPR003591 -
Trre15g02757 483 SMART LRR_typ_2 155 179 IPR003591 -
Trre15g02757 483 SMART LRR_typ_2 59 84 IPR003591 -
Trre15g02757 483 SMART LRR_typ_2 85 106 IPR003591 -
Trre15g02757 483 SMART LRR_typ_2 107 131 IPR003591 -
Trre15g02757 483 Gene3D Ribonuclease Inhibitor 1 277 IPR032675 -
Trre15g02757 483 ProSiteProfiles Protein kinase domain profile. 109 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02757 483 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 149 272 - -
Trre15g02757 483 SUPERFAMILY Protein kinase-like (PK-like) 351 474 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02757 Trre-Chr15 23468976 23471042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02757 359 474 Receptor kinase-like Gene Family AT3G47570 37.069 4.29e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02757 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02757 - K13420 tpra:123895878 474.552