Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02756 ATGTCATTACTAACAATGTTGGAAATTGAACAAAACCACCTCTCAGGCATAATTCAATCAAATAGGGGATATAGCCTTCCTAACTTGCAATTACTACACTTGAACAACAACAAATTTGTTGATCTGTCAGGGAATCATATGGTTTCCAGTCTTCCTAAGTCTATCGGAAACATAACTTGCCCATATTTTTATGCAAGTTCGTGTGGAATTGTTGGTAATATTCCCTTAGAAGTTGGAAACATGAGCGAATTGTTACTTTTTGCTCTACATGATAATAATTTAAATGGACCAATACCTGGTACATTCAATGGATTACATAAACTTCAGCGATTGGACCTTAGCTACAATAGACTACAAGGATCATTTATTGAGGAGCTTTGTGAAACTAAGAGATTAGAATGGTTGAATCTTGGAAATAATAAAATTTCTGGAGTTTTACCAACATGTTTGGGAAATTTGACTTTTCTTCAAAATTTATACATAGGAAATAACCGTTTCAACTCTAGGATACCTTTTTCTCTTTGGAGTCTCACAGATATCTTAGAGATAGATTTGTACTCTAATGCAGTCATCGGCAATCTTCCACCTGAAATTGGGAATTTGAGAGCAATTACACTTTTGGATCTATCTAGAAATCAAATTTCAGGAAACATTCCTGCAACAATCAGTTCCTTAAAAACTTTGCAGAATCTCTCCTTAGCACATAACAAACTGATGGGATCAATTCCCAAATCACTTTATCAAATGGTAAGCCTGATGTCCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTTTCGTATAACAGATTACAAGGAGAGATTCCTGATGGTGGAGTTTTCAAAAAGTTGACGGCTCAATCTTTTATGCATAATGAAGCGCTTTGTGGCAATCCTCGCCTACATGTACCTCTGTGTGATAATCAAGTTAAGAGAAGTTTAATGGAAAAGTTGTTACTCAAATGCATAATTCCCATAGTTGTCTCAACCATTTTGATTGTTGCAAGCATCATAATTTTGAAAGGTAAGAAAAGGAAAAAGGTTGCAAATACTCTTGAAAGGGGTTTGTCAACTTTAGGTGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAAGGGGGGATTTGGCTCTGTGTATGAGGGGAAGCTTCCTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGATGTAAAATCAAAAAGCTTTGATATAGAATGCAATGCAATGAAAAATCTCAGACATCGAAATTTGGTTAAGATTATCAGTGGTTGTTCGAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCACATAACTATTGTTTAAATTTCTTACAAAGATTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCATTTCCAGTGGTTCATTGTGATCTAAAGCCAACTAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTAAAACACATACAGAGACATTAGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAGTGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAACCAGCAGATGATATGTTTGTTGCAGGGCTAAGTTTGAAAACATGGATCAGTGGATCGTTGCCTAATTCTATTCTTGAGGTCTTGGATTCTAATTTAGTCCAACAATATGGGGAGCAAATTGATGAAATAGTTACATACATGTCAACTATTTTTGGTTTAGCCCTTAATTGTTGTGAATATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTGCTTCCCTAATCAAACTCAAGAATTTGGTTCTTAGCAGAAACATGGTCTAG 2034 0.352 MSLLTMLEIEQNHLSGIIQSNRGYSLPNLQLLHLNNNKFVDLSGNHMVSSLPKSIGNITCPYFYASSCGIVGNIPLEVGNMSELLLFALHDNNLNGPIPGTFNGLHKLQRLDLSYNRLQGSFIEELCETKRLEWLNLGNNKISGVLPTCLGNLTFLQNLYIGNNRFNSRIPFSLWSLTDILEIDLYSNAVIGNLPPEIGNLRAITLLDLSRNQISGNIPATISSLKTLQNLSLAHNKLMGSIPKSLYQMVSLMSLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGVFKKLTAQSFMHNEALCGNPRLHVPLCDNQVKRSLMEKLLLKCIIPIVVSTILIVASIIILKGKKRKKVANTLERGLSTLGAPRRISYYELVQATNGFNESNLLGKGGFGSVYEGKLPDGEMIAVKVIDLQSDVKSKSFDIECNAMKNLRHRNLVKIISGCSNLDFKALVMEFMSNGSVDKWLYSHNYCLNFLQRLNIMIDVASALEYLHHGSSFPVVHCDLKPTNVLLDENMVAHVSDFGIAKLMDEGQSKTHTETLATIGYLAPEYGSSGIVSVKGDVYSYGIMLMEIFTRKKPADDMFVAGLSLKTWISGSLPNSILEVLDSNLVQQYGEQIDEIVTYMSTIFGLALNCCEYSPEARINMADVTASLIKLKNLVLSRNMV 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02756 677 FunFam Serine-threonine protein kinase plant-type 373 467 - -
Trre15g02756 677 ProSiteProfiles Protein kinase domain profile. 392 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02756 677 Gene3D Ribonuclease Inhibitor 1 323 IPR032675 -
Trre15g02756 677 Pfam Protein kinase domain 393 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02756 677 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Trre15g02756 677 PANTHER OS04G0122200 PROTEIN 2 665 - -
Trre15g02756 677 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 38 325 - -
Trre15g02756 677 SMART serkin_6 392 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02756 677 SMART LRR_typ_2 153 177 IPR003591 -
Trre15g02756 677 SMART LRR_typ_2 131 152 IPR003591 -
Trre15g02756 677 SMART LRR_typ_2 201 225 IPR003591 -
Trre15g02756 677 SMART LRR_typ_2 26 50 IPR003591 -
Trre15g02756 677 SMART LRR_typ_2 105 130 IPR003591 -
Trre15g02756 677 SMART LRR_typ_2 249 272 IPR003591 -
Trre15g02756 677 SUPERFAMILY L domain-like 66 314 - -
Trre15g02756 677 Gene3D Transferase(Phosphotransferase) domain 1 468 674 - -
Trre15g02756 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Trre15g02756 677 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 468 676 - -
Trre15g02756 677 SUPERFAMILY Protein kinase-like (PK-like) 373 664 IPR011009 -
Trre15g02756 677 Gene3D Phosphorylase Kinase; domain 1 375 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02756 Trre-Chr15 23468976 23471358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02756 1 668 Receptor kinase-like Gene Family AT3G47570 36.250 1.52e-137 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02756 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02756 - K13420 mtr:25481440 963.755