Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02734 ATGAAGAAGAATATGAAAAAAGGAAAAATTCCAAAAGGGAATAAAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTGTGGATACACCTCTAATCCTGTTAGCTTCATGGAAAAACGCAAGTCTTTGTATGGTAATGTGTTCAAAACAAGCATTTTAGGAACGGGTGTAATTGTGTCCACAGACCCAGAAGTGAACAAGGTGATTCTACAAAACCAAAGAAACATCTTTGTCCCTGCTTATCCAAAATCAATTAGAGAACTAATGGGAGAACACTCTATACTTCAAATGAATGGAAACATGCATAGAAAAATTCATTCACTCCTTGGAGGATTTATGAGATCACCACAATTCAAAGCTCGAATCACAAGAGATATTGAGCACTCTATCAAACAATGTTTAGCTACTTGGACCAATCAACCAATATATGTTCAAGATCAAGTCAAAAAGATTACGTTTACTATTTTGGTGAAAGTTTTGATGAGCATTGATCCCGGTGAAGATTTATACATGTTAAAGAGAGAATTTGAAGAGTTCATCAAAGGATTGATTTGCTTGCCCATAAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAGAGAATGATGAAAATTGTGCAGAGAATAATAGAGGAAAGAATTAATTATTATAAGAATAATAAGGATTGTGTGACAAATGATGTAGTGGATGTACTCTTGCAAGATAAAGGTGATTCTAACACAATTCCTAATATATGGTTGAAAAATATGAGTGAGAATATCATTGAGATGATGATTCCTGGGGAAGAGACTCTTCCTACAGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTCTCCTCTTGCTCTATCCAAATTAGTGGAAGAGAACATGGAATTGAAGAGGAACAAGAATTGTTCTGATGGTTATGCATGGAATGACTACCTCTCACTACAATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCAAATATTGTCAATGCTATTTGGAGAAAAGCTATCAAAGATGTTGATATAAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACATCTGTTCATTTAGATGGCATGAACTATGAAAAACCATTTGAGTTTGATCCATGGAGATGGGAGAAAATTGAAGCTGGGACTAGAAACAATTGTTTTACACCATTTGGTGGTGGACAAAGATTGTGTCCTGGGATAGAACTCTCTAGGCTAGAGCTCTCTACTTTCCTTCATCATTTAGTTACAACTTACAGATGGGTTGCTGAAAAAGATGAAATTATTTACTTTCCAACAGTAAAGATGAAAAGGAAGCTCCCAATTAGTGTGACAACCCTAAACCATTAA 1368 0.3567 MKKNMKKGKIPKGNKGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQMNGNMHRKIHSLLGGFMRSPQFKARITRDIEHSIKQCLATWTNQPIYVQDQVKKITFTILVKVLMSIDPGEDLYMLKREFEEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVQRIIEERINYYKNNKDCVTNDVVDVLLQDKGDSNTIPNIWLKNMSENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLVEENMELKRNKNCSDGYAWNDYLSLQFTQNVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHLDGMNYEKPFEFDPWRWEKIEAGTRNNCFTPFGGGQRLCPGIELSRLELSTFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTTLNH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02734 455 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS E-class P450 group I signature 43 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Trre15g02734 455 PANTHER CYTOCHROME P450 26 10 428 - -
Trre15g02734 455 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 Pfam Cytochrome P450 11 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 SUPERFAMILY Cytochrome P450 5 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 CDD CYP90-like 42 451 - -
Trre15g02734 455 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 1 453 - -
Trre15g02734 455 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02734 455 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02734 Trre-Chr15 23175706 23186821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02734 9 426 Cytochrome P450 AT3G13730 53.081 4.36e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02734 K12637 - gmx:100812489 782.711