Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02729 ATGAACAACATTAGTGTGGAAATAGAAGAGACTGTAAAAGAGTTGAGACAATACTTCAAAACAGGAAAAACAACTAGTGTTACATGGAGGAAACACCAACTCAAAGCTATACTTAATCTTGTTCATGAAAATGAAGATTCTATGTCTAAGGCTCTTTACCAAGATCTTGGAAAGCACCCTGTTGAAGCTTACCGCGACGAGCTTGGAGGAGTAGAAAAATCAGCTCAAAATTCTTTGGACTGTGTTGAAAAATGGATGGCTCCTACAAAGAGCCATATCCCTCTTCTTTTCTTCCCAGCAAAAGGAGAGGTATTGCCAGAACCACTTGGTGTAGTTCTCATTTTTTCCTCTTGGAACTTTCCAATCATGTTGGCATTGGATCCATTAATTGGAGCAATATCAGCTGGAAATGTTGTAGTCATAAAACCATCAGAACAAGCTCCAGCATGTTCTTCTTTTCTTGCCAATACACTCCCTCACTACTTGGACACTAATGCCATAAAGGTCATTGAAGGTGGTGGAGATGTCTCTGAACAACTACTGTTACATAAATGGGACAAAATATTCTTCACCGGAAGTCCACGTGTCGCAAGAATAGTCATGACTTCTGCTGCAAGGAATTTAACTCCTGTTACTTTAGAGCTAGGAGGAAAATGCCCTGCTATATTTGATCACCTTTCCAATCCTTCAGAGTTTAAGACGGCAGTGAAAAGAATAGTAGGAGCAAAGTGGGGAATCTGCAGTGGACAAGCATGTATAGGAATCGATTATCTACTTGTTGAGGAGAAATTCTCATCTGAAGTGATAGAACTATTAAAGAAGTTTATAAGAAAATTTTATGGTGACAACATGGTGGAGTCAAGGGTACTATCAAGAATTATAAACAAACAGCACTTTGAGAGATTGTGTAATCTTCTTAAAGACCCACTTGTTGCTGCTTCAATAGTTCATGGTGGTTCAGTTGATGAAACAAACCTGTTTATTGAGCCAACAATCTTGTTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATATTTGGTCCTCTACTACCAGTGATCACAGTGAATAAAATTCAGGAAAGTATTGGGTTTATAAACTCAAGGCCAAAACCTCTTACCATTTATGCATTCACCACAGATGATGCTTTCAAGAGAAAGATTGTAGCAGAAACTTCCTCTGGAAGTGTCATATTTAATGACACACTTGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAGAGTGGTTTTGGGAGGTACCATGGGAAATACTCATTTGACACATTCAGCCATGAAAAAGCTATAATGCATAGACAACTTTTCCTTGAAATTGAACCAAGGTATCCTCCTTGGAGTAAGTTCAAGCTAGAATTTATCAGATTGGCATACAGATTGAACTACTTTGGATTACTACTGCATATGCTGGGATTGAAAAAACACAACTAG 1461 0.3826 MNNISVEIEETVKELRQYFKTGKTTSVTWRKHQLKAILNLVHENEDSMSKALYQDLGKHPVEAYRDELGGVEKSAQNSLDCVEKWMAPTKSHIPLLFFPAKGEVLPEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSEQAPACSSFLANTLPHYLDTNAIKVIEGGGDVSEQLLLHKWDKIFFTGSPRVARIVMTSAARNLTPVTLELGGKCPAIFDHLSNPSEFKTAVKRIVGAKWGICSGQACIGIDYLLVEEKFSSEVIELLKKFIRKFYGDNMVESRVLSRIINKQHFERLCNLLKDPLVAASIVHGGSVDETNLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVNKIQESIGFINSRPKPLTIYAFTTDDAFKRKIVAETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAIMHRQLFLEIEPRYPPWSKFKLEFIRLAYRLNYFGLLLHMLGLKKHN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02729 486 PANTHER ALDEHYDE DEHYDROGENASE 7 477 IPR012394 GO:0006081
Trre15g02729 486 FunFam Aldehyde dehydrogenase 16 221 - -
Trre15g02729 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Trre15g02729 486 FunFam Aldehyde dehydrogenase 217 420 - -
Trre15g02729 486 SUPERFAMILY ALDH-like 7 455 IPR016161 GO:0016491
Trre15g02729 486 PIRSF ALDH 1 483 IPR012394 GO:0006081
Trre15g02729 486 Pfam Aldehyde dehydrogenase family 7 439 IPR015590 GO:0016491
Trre15g02729 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02729 Trre-Chr15 23130094 23134504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02729 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 61.157 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02729 K00128 - gmx:100809812 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02729 15 23130094 23134504 Trre15g02729 15 23130094 23134504 ECH