Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02707 ATGAACCAAAAACGAAAACAGAGACCCAAAAGGGAAAAGAATTTTAAATTATGGGTCAAAGGTCCTGGTCAGGGAAATTCTGGTCAAACTGACAGCTGGCGCGTGCAACACACGCTCCTGTACGGCGAGTGGTTATCGCGACACGTGCATGGCGCCACCGCCGCCGCCCCTTTCCCGCCGTCACAGGGCGGCGGTTTTCCTTCCATATTCTCAATAGACCGCCACATAATTTCAGGTTCCCAAAAGGAGGTGGCAATAGATGTCCCAAAAGTAGGTGCTGTTATTATGCAGTGCAGGATTTGTTTGAAGAAGGGTGAACATTGGACTGCAAAGTGTCCACTTAAGGATATCTCACAACGATCAGTTATTGATTCTATTGATTCTCAAGTGCTGCATAGCTGA 402 0.4776 MNQKRKQRPKREKNFKLWVKGPGQGNSGQTDSWRVQHTLLYGEWLSRHVHGATAAAPFPPSQGGGFPSIFSIDRHIISGSQKEVAIDVPKVGAVIMQCRICLKKGEHWTAKCPLKDISQRSVIDSIDSQVLHS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02707 133 Pfam Eukaryotic translation initiation factor 3 subunit G 91 117 IPR024675 -
Trre15g02707 133 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02707 Trre-Chr15 22911215 22912536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02707 90 118 Eukaryotic Initiation Factors Gene Family AT3G11400 68.966 3.69e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02707 K03248 - mus:103995462 54.6842