Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02703 ATGATGGAGTCATGTGTCCCACCTGGATTTCGGTTTCATCCAACAGATGGAGAACTTGTTGGTTATTATCTTAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATCGATTTATATCGTATCGAACCATGGGATCTTCAAGGGAGATGCAGAATTGGGAATGAGGAACAACATGAGTTTTATTTTTTTAGTCACAAAGACAAGAAATATCCAACGGGGACAAGAACAAACAGAGCTACAATGGCAGGGTTTTGGAAAGCAACCGGAAGAGATAAGTCGGTGTACGAACGAACAAAACTGATTGGGATGAGGAAGACGCTCGTTTTCTACAAAGGAAGAGCTCCTAATGGACACAAAACTGATTGGATCATGCATGAGTATAGGCTTGAAACAATTGAAAATGCACCTCCACAGGAGGAAGGTTGGGTTGTATGCAAAGCATTCAAGAAAAAAACCAATTTCCAAACAAAGACTAATGCAAGATGGAATCCAAGTAATTACTTATATGATGAACAAACAAGTGGCATCATCTCAAAGGTAGACCCTTTTCATGACCTCACCTTAAGTCAACCTCAGAGGATTCCACCTCAAAATTTCATGTACAAACAAGAGATAGAAGAAGATAGCATATTAAGCTTCATGCATTCAGAACATTTGTTACCTCTTCCTCAGCTAGAAAGTCCCTCTATGGCAAAGAGACAAAACACAATGTCAATAATATCTGAAAATAACATTAACAATAATGATTTTCAAAATGGATTATTGTACAACATAAACAAAACAGAGAAAGTGACTGATTGGAGGGCTTTTGACAAGTTTGTGGCTTCTCAATTGAGTCAAGAAGATCATAGGCATGACACAAGCTCAGATATGTCATTGTTGCTACTTCAAAGTAGTAGAGATGAAGAGAATAAGTTAAGCTCATTTTTAAGTACAAGCTTAGAATGTGATGTTGGGATATGTTTATTTGAACATTAA 993 0.3696 MMESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQGRCRIGNEEQHEFYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGHKTDWIMHEYRLETIENAPPQEEGWVVCKAFKKKTNFQTKTNARWNPSNYLYDEQTSGIISKVDPFHDLTLSQPQRIPPQNFMYKQEIEEDSILSFMHSEHLLPLPQLESPSMAKRQNTMSIISENNINNNDFQNGLLYNINKTEKVTDWRAFDKFVASQLSQEDHRHDTSSDMSLLLLQSSRDEENKLSSFLSTSLECDVGICLFEH 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02703 330 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Trre15g02703 330 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Trre15g02703 330 FunFam NAC domain-containing protein 15 159 - -
Trre15g02703 330 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Trre15g02703 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 248 - -
Trre15g02703 330 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02703 Trre-Chr15 22882637 22886646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02703 2 330 NAC Transcription Factor Family AT2G18060 56.948 2.82e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre15g02703 NAM 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02703 - - aprc:113869508 445.662