Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02695 ATGAAGCGTTCGAGGAAATCTAATAGGGTTTCTTGGGCTCCTGGTTCCAATCTTTGTCAGGTAAAATTGTTCTTGTCTGATGATTACCCGTCAAAAGTTGGCCTGAAATCACAAGATAATCTTAAAGGAAAGGCATCATCAATGTTGTGTTCTAGCTCCAATGAATATGTTGATTTACCTCCTGGGTTTGAAAGCAGTCATTTCCCGAACCAATCAAAGGCTGAATTCTCCCATATTCCAAAGATAAAATGGGAATGCCCTCTCCCGTTTGTTTTCAGTTCTGCTTGGCTAGTTGCAGCTGGTGAAGAAAGTAGGGAGATAGAGATTCAGAAGCTGAGAGAAATTAGAGTGCTTGAAGCAGTTTATCCCCGACACTCTGCCATTCCTCCTAGCCCTTCTGTTTCTTTAGATGTAAAAGAGGAAGATTATAATGATAACCTTACTCCTCTCATCCCACTCATTCCTGTCGAGGAGGAAGAGTCCATGGAGGCAGCAGTGAACCCTCAACCCAATGGGCAGTCACAGAACTTGCATAAATATATGTCAGCACCAACTTCCTCTTGTACCATCTCCTCGGATGCTTGTGTAATGCCCTTAGCTGGGGTATCTTCTGGTTCTGTAGCTGACATAGCAGCAGCCTCTGATGTTGTGGCAGCCATCCTGAAGAGTAAAGAGCAAGGAGGCTTAATTGATATGGATCTACTGGTTAAAATATTGAATGACCCGAAAATGATTGAGAATTTAATCAGTGAACATGGATCGAAAACTGCTACCTCAAATTCTGTGGTTACATCCACATCTGGATTGAAAGCTGCTACCCCATCAGTTCCGATGTTTACACCTACACCTGATGCGGCAGCTTCTAGGAACACACACCCTAGTTCTGTGGGTTTTTCTGGTTTGAAGCCTTCAACTCCATCAGTTTCATCTTTGAATCATGCATCTGGTAAGCCAGCAACTCTGTTTGCTCCTGCAATTCCATCATATTCAATTGTGACTTCTGCATATGACAAGACAGCAACTGCATTAGTTCCATTGTCTAGGCCGGTATCCGGTAAACCAGCATCCCCCTCTGTTTTTATGCCCACACCTTCACCTGCATCTCATATGCCTAGACCTGTGAACAATGATTTTCACGTGTCAAATGGAATGCCAACTGCTTTGACTTCGCAGCCTGTCAACAATGCTTTTCACATGTCAAATGGAATGCCAACTGCTCTGAATTCACAGCCTCGGCCAGATTCATTTCTGGCTTCTGGGGCGAATCGATCTGCATCTTTTACTTTTGCTTCCATATCTTCTAGTGAACAAAACACAGTTCCATTGCCTCCTTCTACTGGGAACTTGCATGCTGTTTTGAACCATACACAAACCACTGCTAGTACAAATCCTTATCAAACCAGTACAGGTTCAGCATCTTCTGTAAAGGATGTTGACTATTATAAAAACCTCATTAGGCAACATGGTGCAGATGGACATGATATGCTGGACTCACAAATAGGTACTCGTCGTAGTAACTTCCAAGATAAGAATCCGGTAAATAACAATAATCAAGGGGAGGTGAAATTCAAAAGCAAGAAACAATGCATATACTTTAATAGCTCAAAGGGGTGCAGGAATGGTTCCGATTGCCCCTTTCAGCACGATGTTTCAGCTCAGTCAGGAGCTGGTAACTTCCTAGGGGGCAATAGTGCTAAAAGATTTAAACTGTGA 1713 0.4302 MKRSRKSNRVSWAPGSNLCQVKLFLSDDYPSKVGLKSQDNLKGKASSMLCSSSNEYVDLPPGFESSHFPNQSKAEFSHIPKIKWECPLPFVFSSAWLVAAGEESREIEIQKLREIRVLEAVYPRHSAIPPSPSVSLDVKEEDYNDNLTPLIPLIPVEEEESMEAAVNPQPNGQSQNLHKYMSAPTSSCTISSDACVMPLAGVSSGSVADIAAASDVVAAILKSKEQGGLIDMDLLVKILNDPKMIENLISEHGSKTATSNSVVTSTSGLKAATPSVPMFTPTPDAAASRNTHPSSVGFSGLKPSTPSVSSLNHASGKPATLFAPAIPSYSIVTSAYDKTATALVPLSRPVSGKPASPSVFMPTPSPASHMPRPVNNDFHVSNGMPTALTSQPVNNAFHMSNGMPTALNSQPRPDSFLASGANRSASFTFASISSSEQNTVPLPPSTGNLHAVLNHTQTTASTNPYQTSTGSASSVKDVDYYKNLIRQHGADGHDMLDSQIGTRRSNFQDKNPVNNNNQGEVKFKSKKQCIYFNSSKGCRNGSDCPFQHDVSAQSGAGNFLGGNSAKRFKL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02695 570 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 570 - -
Trre15g02695 570 ProSiteProfiles Zinc finger C3H1-type profile. 523 551 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02695 Trre-Chr15 22832194 22838012 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trre15g02695 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02695 - - cam:101501407 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02695 15 22832194 22838012 Trre15g02695 15 22832194 22838012 ECH