Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02692 ATGAGGTTGTGCAGTGAGGTTATCTCATTATCGTCTGCACATGCACTCGCTCCTGTACCTTTCTTCTGCAACAAAACTATACTACCATTTCAATTTCAAAACCCTTTCTTCTTCAAACTCAAATTCAAATTCAACAACTCCACCTCGTTTTCTTCTACCTCTCTCACCCATCGGAACCCGTTGCCAGCTCAAGCTCAAGTACTACCCTCATGCTCAACGGACGCTTTTGATTTTGTAGTCGTTAATTTCTACCATTTTGTCTTCATCAAAGACCCTCTACAACAAGTCGCCAAACACCTCTCTTTCCTCGAATCTGAGGGTCTAGATATCCATGGAAGAATCTATTTGAACGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGATGCTATGATGTATGTCAACTGGATAAAAGAGGATGACAAGTTTTCCGACATCCTGGTTCAGATATCTCAATCAGAAACTGGACACACCTTTCCATCATTGAAGTTGCGGTATAAGCCTTCATTAGTACAGTTTAAAAGTGACATATCAGATCTTCCGGTGCTTGATCCTTCAATGCGGGCAATACCTTTAGCACCTTCAGAATGGAGAGATAAATTAGAAGCCATCAATAGAAATGATCCACATTCAAAAGATTATCCTAACAGAGATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGACCTAATGTGGACTGCTTTAGGAGCACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAATACAAATATATTGATGTATTGCACAGGAGGGATTCGCTGTGATGTGTATTCCACAATACTGAGGCAGCATGGATTTCAGAATTTGTATACCCTTCAGGGAGGCGTTTCTAACTATATAAAGAACGAAGGTCCTGCAGAATGGATAGGAAATTTATTTGTTTTTGACTCCCGATTGTCTCTCCCTCCTCCTGTTTACTACCCTCAGGCCAATACTGAAGTTGGGACTCCAACTCCAGTTTCTAAAGATGATAAGTTTGCAAAATGCTACATATGTAACTCGGGAGTCAGTGAACTGAGACATCGTAATTGTGCGAATCTTGACTGTAACTTGCTTTTTCTATGCTGCAAAAAATGTGTAAAGGATCAAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTCCTAGGCTTAGACCTGTTTTAAATGGAGAGCATAGATACAAGAAATGGCACATCTATCGTGACATGGATTTGCAAGGCAATACAAGAATTTCAACTTGA 1317 0.4032 MRLCSEVISLSSAHALAPVPFFCNKTILPFQFQNPFFFKLKFKFNNSTSFSSTSLTHRNPLPAQAQVLPSCSTDAFDFVVVNFYHFVFIKDPLQQVAKHLSFLESEGLDIHGRIYLNEQGINAQYSGPSKDAMMYVNWIKEDDKFSDILVQISQSETGHTFPSLKLRYKPSLVQFKSDISDLPVLDPSMRAIPLAPSEWRDKLEAINRNDPHSKDYPNRDYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQHGFQNLYTLQGGVSNYIKNEGPAEWIGNLFVFDSRLSLPPPVYYPQANTEVGTPTPVSKDDKFAKCYICNSGVSELRHRNCANLDCNLLFLCCKKCVKDQRGCCCLTCTTAPRLRPVLNGEHRYKKWHIYRDMDLQGNTRIST 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02692 438 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 193 334 IPR036873 -
Trre15g02692 438 CDD RHOD_YceA 194 313 - -
Trre15g02692 438 Pfam Rhodanese-like domain 220 312 IPR001763 -
Trre15g02692 438 ProSiteProfiles Rhodanese domain profile. 217 320 IPR001763 -
Trre15g02692 438 Gene3D - 187 342 IPR036873 -
Trre15g02692 438 Gene3D - 70 173 - -
Trre15g02692 438 SMART rhod_4 197 317 IPR001763 -
Trre15g02692 438 Pfam UPF0176 acylphosphatase like domain 79 170 IPR040503 -
Trre15g02692 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 74 421 IPR020936 -
Trre15g02692 438 Pfam Rhodanase C-terminal 322 404 IPR022111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02692 Trre-Chr15 22769337 22779028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02692 77 431 Sulfurtransferasese or Rhodanese AT1G17850 65.847 1.12e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02692 - - mtr:25488455 677.552