Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02660 ATGCATTCAGAGAGATTCAACGATTGCTTGCCACAATGGAAGATAGCTTTGCAACAAGTAGCTAACTTGTCTGGCTGGCATTTCAAAACTGGGGATGGATATGAATACGAGTTTATTGGAAAGATTGTTGAACATGTTTCCAAGAAAATTAACCAGGACATGGCTAAAGAAATCGTTCGATTGGAATCACCAGATGACCCTGGAAAACGTAGTCGCTTATGGTTTCACGAAGATATAATTCAAGTTTTAGAAGAGAATACTGGAACTAGTGCGATCAAAACCATATATCTGATGCGTTGGAACATAAAAAACATGATGTATAAACATGAGTTGGTTGACCCATTGAAAAAGTTCTTGAATGTTAAGACTTTGAATTTTGACGAGGCAAATTGTTTGACAGAAATACCTGATGTAAATGTTACTGAATCAGGAATTGCATGA 441 0.3651 MHSERFNDCLPQWKIALQQVANLSGWHFKTGDGYEYEFIGKIVEHVSKKINQDMAKEIVRLESPDDPGKRSRLWFHEDIIQVLEENTGTSAIKTIYLMRWNIKNMMYKHELVDPLKKFLNVKTLNFDEANCLTEIPDVNVTESGIA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02660 146 Gene3D - 1 57 IPR035897 -
Trre15g02660 146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 126 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02660 Trre-Chr15 22395281 22398534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02660 52 103 WRKY Transcription Factor Family AT4G12020 51.923 5.46e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02660 - - gmx:100780257 80.4925