Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02628 ATGGTTGAAATTCCTGACGGATTTTCTTTTGAGATTGAGGACAACCCTGGAGAAAGAACTATTCAACTAACAAGAAAATATGAGGATGACACTATCACAGTTCAAGTTGAAATCCCTACTGTAGGGTCTGGACAAAACGAGGATGACGATGTGGATGACAACGAGAAGAATGATAGTGAATCTAGCATTCCTTTAGTTGTTAATAAGCCTAACGAATCTGAAGACAAGCTGGTATACGAGGGGCCTGAGTTCACTGATTTGAATGAAAATCTGCAGAAGGCTTTCCTCGAGTATTTCGAGATCCGAGGGATATCACCCAGCACAACCAACTTTTTGCAGGAATACATGTTTAACAAAGACAACAAGGAATACTTGTCAAGTGGTCTTCGTCTGCGGGATGTCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGTTGGTTTCATTCAAGAATAAGCTTCAATGGCAAGATATTGGGCATAAATTGAAAAGTTTAGTTCACAAAATTCCATGCAATGCATTCATGATGTCTAATATGCCAGGATTAGGTGCAAGCCTCAGCCTTATTTCCAACACAAGAACCGATGGGATAGGAGCTCTATACAGAGAAGGTGCAGTTTCCTTCCTTAACAACAAGTTCCCTTACACAACTGAGCAAGTCAGAGACAAATTTGTAGCATCACTCAGCTCAAATAAGGCTGCAACAACACAAGCTCATCTCTTCCGGATGGCGAACGAGGGGAAAATCAAGCCTAGAGCATGA 777 0.4118 MVEIPDGFSFEIEDNPGERTIQLTRKYEDDTITVQVEIPTVGSGQNEDDDVDDNEKNDSESSIPLVVNKPNESEDKLVYEGPEFTDLNENLQKAFLEYFEIRGISPSTTNFLQEYMFNKDNKEYLSSGLRLRDVRSVDPSLFLTNSMPSLLVSFKNKLQWQDIGHKLKSLVHKIPCNAFMMSNMPGLGASLSLISNTRTDGIGALYREGAVSFLNNKFPYTTEQVRDKFVASLSSNKAATTQAHLFRMANEGKIKPRA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02628 258 Pfam Mitochondrial glycoprotein 72 125 IPR003428 GO:0005759
Trre15g02628 258 Pfam Mitochondrial glycoprotein 3 60 IPR003428 GO:0005759
Trre15g02628 258 Gene3D Mitochondrial glycoprotein 68 135 IPR036561 -
Trre15g02628 258 MobiDBLite consensus disorder prediction 36 66 - -
Trre15g02628 258 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 5 126 IPR036561 -
Trre15g02628 258 Gene3D Mitochondrial glycoprotein 2 67 IPR036561 -
Trre15g02628 258 PANTHER PROTODERMAL FACTOR 1 177 256 IPR039923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02628 Trre-Chr15 22181171 22183923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02628 118 152 MRS2 Gene Family AT5G22830 70.270 2.05e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02628 K15414 - gmx:100803348 162.925