Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02625 ATGAAGCTTTCCACCTTTGTTAAATCTTTTTATGTCTATTCTTTTCTAGTTTTGTATCATCCATTTATTGTGACAGCTACAATTAAACCTCTTTATAAAAACTATTCATTTCCTGCTGTTATTGCATTTGGTGATTCAATCTTAGATACTGGTAATAACAACTATATTGCAACCATAGTTAAGGCGAATTTCAAACCGTACGGAAAGGATTTTATTGGAGGAAAACCGACAGGAAGGTTTTCTAATGGAAGAATCCCTTCTGATTATTTCCTTGAATACCTTGGTATTAAGGAGGCTATGCCAGCTTATCTTGATCCAAATTTGAGTACTGAAGAGCTATTAACTGGAGTGTGTTTTGCATCATCTGGTTCAGGATATGATCCTCTTACAATTGAACTAGCATCAGTGTTGTCAACAGAGGATCAACTAGATTTGTTCAAAGAGTATATTGGTAAATTGAAGGCAGCTGTGGGAGAAAATAGGACAACTGAGATTATTGCAAATAGCATAATTATCATAAGCATGGGAACAAATGATATTTCAGGATCATATTATTTGTCACCCTTCAGAAAGCATGAGTATGATATAGAAAAGTATACAGATATGCTTATTAGTGCCAATTCAAAATTTGTTGAGGATCTTTATGAATTGGGAGCAAGAAGGATTGGAGTTTTCAGTTTATCACCAGTTGGATGTGTGCCACTTCAAAGAACCATAAAAGGAGGCATAAGAAGGAATTGTGTAGAAAATGTAAATGAGGGAGCATTGATTTTCAACTCCAAGCTTTCCTCTTCACTCATAGATCTATCAAAAAAACTTCCAGATTCCAGGGTTGTCTACCTTGAAAATTTTAGTCATTTGCATGACATGATCATAAACCACAATAACTATGGATTTGAAAATGGGGATGGTTCATGTTGTGGCTTTGCAAATATAGAACTACTCTGTAGTTCTTTAACCTTAAAAGTTTGTCCAGATACCACTCAATATGTGTTCTGGGACAGTTATCATCCTACAGAGAAAGCTTACAAAATACTTGTCACACAAATATTAGATAACAAGATTGATGAGTTTGTTTGA 1080 0.3444 MKLSTFVKSFYVYSFLVLYHPFIVTATIKPLYKNYSFPAVIAFGDSILDTGNNNYIATIVKANFKPYGKDFIGGKPTGRFSNGRIPSDYFLEYLGIKEAMPAYLDPNLSTEELLTGVCFASSGSGYDPLTIELASVLSTEDQLDLFKEYIGKLKAAVGENRTTEIIANSIIIISMGTNDISGSYYLSPFRKHEYDIEKYTDMLISANSKFVEDLYELGARRIGVFSLSPVGCVPLQRTIKGGIRRNCVENVNEGALIFNSKLSSSLIDLSKKLPDSRVVYLENFSHLHDMIINHNNYGFENGDGSCCGFANIELLCSSLTLKVCPDTTQYVFWDSYHPTEKAYKILVTQILDNKIDEFV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02625 359 FunFam GDSL esterase/lipase APG 30 355 - -
Trre15g02625 359 CDD SGNH_plant_lipase_like 38 353 IPR035669 -
Trre15g02625 359 Pfam GDSL-like Lipase/Acylhydrolase 40 347 IPR001087 GO:0016788
Trre15g02625 359 PANTHER GDSL ESTERASE/LIPASE EXL3 19 350 - -
Trre15g02625 359 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Trre15g02625 359 Gene3D SGNH hydrolase 28 355 IPR036514 -
Trre15g02625 359 SUPERFAMILY SGNH hydrolase 40 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02625 Trre-Chr15 22164960 22166670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02625 34 353 Pollen Coat Proteome AT1G75910 41.231 1.18e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02625 - - mtr:11443183 569.696