Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02624 ATGATGAAGCTTTCCACCTTCAAATCTTGTTATGTCTGTTCTTTTCTGGTTTTGTTTTATCCATTTGTTGTGACAGCTACAATTAAACCTCTGTATAAAAACTATTCATTTCCTGCTGTTATTGCATTTGGAGATTCAATCTTAGATACCGGTAATAACAACTATATTGCAACAATATTAAAGGCGAATTTCAAACCGTATGGGAGGGATTTTATTGGAGGAAAACCGACTGGAAGGTTTTGCAATGGAAGAATTCCTTCCGATTATTTCCTTGAATACTTTGGTATTAAGGAGGCTATGCCTGCTTATCTTGATCCAAATTTGAGCACTGAAGAGCTATTAACAGGAGTGTGTTTTGCATCAGCTGGTTCAGGATATGATCCTCTTACAATTGGACTAGCATCAGTAATTTCATCAGAGGAGCAACTAGATATGTTCAAAGAATATATAGGAAAATTAAAGGCAGCTGTGGGAGAAAATAGGACAGCTGATATTATTTCAAATAGCATATATATCATAAGCATGGGAAGCAATGATATTTCAGAAACATATTATTTGACTCCATTTAGAAGGATTGAGTATGATATAGAAAAGTATACAACTATGCTTGTTAGTGCAAATTCAAAATTTGTTGAGGATCTTTATGAATTGGGAGCAAGGAGGTTTGCAGTGTTCAGTTTATCACCAATTGGATGTGTGCCACTGCAAAGAACTATAAAAGGAGGCCTAAGAAGGGATTGTGTAGAAAAACTAAATGAGGGAGCATTGATTTTCAACTCCAAGCTTTCCTCTTCACTCATAGATCTATCAAAAAAACTTCCAGATTCCAGGATTGTCTACCTTGAAAATTTTAGTTTATTGCATGACATCATCATAAACCACAATAAATATGGATTTTCAAATGGGGATGGTTCATGTTGTGGCATTGCAAATATAGAACTTGGTCCTCTATGTAGTTCTTTCACCTTAAAAGTGTGTCTAGATACTACTAAATATGTGTTCTGGGACAGTTATCATCCAACAGAGAAAACTTATAAAATACTTGTGTATGATATCTTAAGTAAAAAAGCTGATGAGTTTATTTGA 1086 0.3435 MMKLSTFKSCYVCSFLVLFYPFVVTATIKPLYKNYSFPAVIAFGDSILDTGNNNYIATILKANFKPYGRDFIGGKPTGRFCNGRIPSDYFLEYFGIKEAMPAYLDPNLSTEELLTGVCFASAGSGYDPLTIGLASVISSEEQLDMFKEYIGKLKAAVGENRTADIISNSIYIISMGSNDISETYYLTPFRRIEYDIEKYTTMLVSANSKFVEDLYELGARRFAVFSLSPIGCVPLQRTIKGGLRRDCVEKLNEGALIFNSKLSSSLIDLSKKLPDSRIVYLENFSLLHDIIINHNKYGFSNGDGSCCGIANIELGPLCSSFTLKVCLDTTKYVFWDSYHPTEKTYKILVYDILSKKADEFI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02624 361 Gene3D SGNH hydrolase 28 358 IPR036514 -
Trre15g02624 361 CDD SGNH_plant_lipase_like 38 355 IPR035669 -
Trre15g02624 361 Pfam GDSL-like Lipase/Acylhydrolase 40 348 IPR001087 GO:0016788
Trre15g02624 361 PANTHER GDSL ESTERASE/LIPASE EXL3 19 351 - -
Trre15g02624 361 FunFam GDSL esterase/lipase APG 30 357 - -
Trre15g02624 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02624 Trre-Chr15 22161446 22163452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02624 12 352 Pollen Coat Proteome AT1G75910 41.143 2.11e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02624 - - mtr:11443183 574.318