Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02622 ATGAAATCACTCTTTGATATGCTTCATTCTCTATGGCCTCTAATAATTTTTTTGTGTTATTTCATAGCCATAATCTTACAAAATGTTTCTTCTATGAGTCTACCAAACAATGAAACAGTTCCAGCAGTTTTTGTATTTGGTGACTCTATAGTTGATCCAGGAAATAACAACTATATCAACACTCTTATCAAATGTAATTTTCCACCATATGGTAGAGATTTTGATGGAGGAATTCCAACTGGCAGGTTCAGCAATGGTTTTGTCCCCTCAGACATAGTTGCTCAAAAATTTGGAGTCAAGCAAATTTTACCTGCTTATCTTGATCCTAATATACAACTTCAAGATCTTCTTACCGGTGTAAGCTTTGCATCTGGTGGTGCCGGATATGATCCTCTAACCGCGAAAATAATGTTTGTGAAGTCATTATCAGATCAATTAGACATGTTCAAGGAGTACAAGAAGAAGGTAGAGGAAGCAGTTGGAGGAAAGAAAAGAGAAGAAATAGTATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACACCATTTAGACGTATTCTGTATGATATTCCATCATACACAGATTTTTTGATTTCTGAAGCCTCAAAATTCTTGCAGGAACTATATGGACTTGGAGGTAGAAGGATTGGAGTATTCAATATACCAGTTATAGGGTGTGTGCCTTCACAAAGAACAATTAATGGAGGCAAACATAGAGAATGTTTAAATTCTTCAAACCAAGCAGCAAAACTCTTCAACTCTAAACTCTTCTTCAAAATGAAGGCACTAGGGAAAGAGCATTCAGATGCTAGATTTGTATATCTAGATTCTTACAATCCATTTGTTGATATCATTCAAAATCCTTCTAAATATGGTTTTAATGAGACAGATAAAGGATGTTGTGGTACAGGAGATATAGAAGTTGGGATTTTGTGCAATCCTTTCATGAACACATGCTCAAATCCTTCAGATTATGTTTTTTGGGATAGTTACCATCCTACAGAGAAGACTTATTATGTGCTTAGTTCACTTGTACTTGATAACAAAATTAAGGACTTCTTCTAA 1092 0.3489 MKSLFDMLHSLWPLIIFLCYFIAIILQNVSSMSLPNNETVPAVFVFGDSIVDPGNNNYINTLIKCNFPPYGRDFDGGIPTGRFSNGFVPSDIVAQKFGVKQILPAYLDPNIQLQDLLTGVSFASGGAGYDPLTAKIMFVKSLSDQLDMFKEYKKKVEEAVGGKKREEIVSKSIYIVCIGSDDIANTYAQTPFRRILYDIPSYTDFLISEASKFLQELYGLGGRRIGVFNIPVIGCVPSQRTINGGKHRECLNSSNQAAKLFNSKLFFKMKALGKEHSDARFVYLDSYNPFVDIIQNPSKYGFNETDKGCCGTGDIEVGILCNPFMNTCSNPSDYVFWDSYHPTEKTYYVLSSLVLDNKIKDFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02622 363 Pfam GDSL-like Lipase/Acylhydrolase 43 352 IPR001087 GO:0016788
Trre15g02622 363 Gene3D SGNH hydrolase 29 359 IPR036514 -
Trre15g02622 363 FunFam GDSL esterase/lipase APG 32 359 - -
Trre15g02622 363 PANTHER GDSL ESTERASE/LIPASE EXL3 22 352 - -
Trre15g02622 363 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02622 Trre-Chr15 22154914 22157450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02622 18 358 Pollen Coat Proteome AT1G75910 39.943 1.89e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02622 - - mtr:11443183 581.637