Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02601 ATGGAAGATGTTTGGAAAGACATCAACCTCCCTTCCTTAAACAACAATATGTGCACAACAACAGTTTCTTCTCCCTCCTTAAAGACACCAACTTCTCTTCATTCCTCCTCCATCAACCTTAACTCTCTACCTGAGTTCCATTTCGACCCTCTTGAACACAATAACTTGCAATTAGAGCAGAGCCACCACCACACTAGTACTGTTTCAAAGGTTGAAGATTTATTGAACAACACAATAGAAAGAAGAAATAAGAGAATAATGAAGAATAGAGAATCTGCTACACGGTCAAGAGCTAGAAAGCAGGAAAGCATTGCTTATATATTTGAGTTGAAGAAAAAAGTGAAGAATTTGGAAGAAGAGAATGCCAAGCTTAAAAGACAACAACAACAACATTTGTGTGATGCCGCAGCCAAGCAGCAGAGGAATGGAAATCTGTATAGAACATCAACAGCTCCATTTTAA 462 0.3831 MEDVWKDINLPSLNNNMCTTTVSSPSLKTPTSLHSSSINLNSLPEFHFDPLEHNNLQLEQSHHHTSTVSKVEDLLNNTIERRNKRIMKNRESATRSRARKQESIAYIFELKKKVKNLEEENAKLKRQQQQHLCDAAAKQQRNGNLYRTSTAPF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02601 153 Pfam bZIP transcription factor 81 129 IPR004827 GO:0003700|GO:0006355
Trre15g02601 153 Coils Coil 100 134 - -
Trre15g02601 153 Gene3D - 79 140 - -
Trre15g02601 153 CDD bZIP_plant_BZIP46 81 138 - -
Trre15g02601 153 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 152 IPR043452 GO:0003700|GO:0045893
Trre15g02601 153 SUPERFAMILY Leucine zipper domain 81 130 IPR046347 GO:0003700|GO:0006355
Trre15g02601 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Trre15g02601 153 SMART brlzneu 77 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02601 Trre-Chr15 21945617 21946980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02601 73 153 bZIP Transcription Factor Family AT3G56850 47.561 1.05e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre15g02601 bZIP_1 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02601 K14432 - gmx:102667912 114.39