Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02578 ATGGAGTTTATGGCAAATTCATGCCCTTTATTGGATTTCTTTGTTCATTTGGTTGAGAGGGTCAGATGGGTTAGTGGCCTCATCATCTCAGTCATCATTGGAAACATCATCTTTGCGATCTTCACATTCTTCTTTGCATTTGTGGGAACTTTGTTGGGGGCTATGAGAGGAGCATTGATAGGCCAAGAAACAGAGAGTGGCTTCATTCGAGGTGCTGCTGTTGGTGCTGTTTCAGGTGCTGTTTTCTCTATTGAAGTCTTTGAATGTTCTCTTGATCTTTGGCATTCTGATCAATCAGGAATTGGTTGTCTCTTGTACTTGATTGATGTTATTACTAACCTATTGAGTGGGAGACTTGTACGTGAATGGATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTAATAATGAATTGAGCTTTTATGAGTTTCAAAATATATTTGACATTGGAGGTGACAGAGGTTTATCAGAGTTTCATGTTCAGTTTGCCTTCAGGATTTCCAAATTGGAGAGACAGTTAGAAGCTTGCCTCATTGTCATCATATGTTTCACCTACCTTGCATTGACAAGTGGCTCATCAAACATGGCTCTTGCCCCACTATGCAGAAGAGATCTATAA 630 0.4095 MEFMANSCPLLDFFVHLVERVRWVSGLIISVIIGNIIFAIFTFFFAFVGTLLGAMRGALIGQETESGFIRGAAVGAVSGAVFSIEVFECSLDLWHSDQSGIGCLLYLIDVITNLLSGRLVREWIGPAMLSAVQSQMGANNELSFYEFQNIFDIGGDRGLSEFHVQFAFRISKLERQLEACLIVIICFTYLALTSGSSNMALAPLCRRDL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02578 209 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 19 165 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02578 Trre-Chr15 21722684 21725164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02578 15 160 C3H Transcription Factor Family AT5G66070 67.123 3.92e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02578 - - gmx:100816939 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01292 9 10943725 10945454 Trre15g02578 15 21722684 21725164 PCT