Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02575 ATGAAGAAAGGAGAGAAAGTTCTCTTGAATATTAAGCTAGAATATGCATTTGGTGAGAGTGGAAAACCTTCACCAGAAGATGATGGTGTTGTCCTTAAGAAGATCTTGAAGGAAGGAGAGGGATATGAACAACCAAATGATGGAGCTATGATTCAAGTGAAACTTATCGGGAAACTGCAAGATGAGACTGTCTTCCTTAAGAAGGGTCATGATGATGATCAGCCATTTGAGTTCAGAATTGATGAAGAACCAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCGTTGGTGATCATACAACTTGATCGAATGCTTTTGGTTAATCTGCTCAGGAATTGGCTATTCACTACTAGAAAACATCATAAGTCTTCTGTAAGTGAACAATCTCTTTCGATGAACAACCTCAACTTCTTCTTCCCGGAGTCTCCGTCCTCCTTCTCTCGTTGTCTCTGGCCAACACGATTAGTAAGGGAAATAGCTGAAGCTTCGTTTCGTCTCGGTGCCGACCAACCTCAACTTATTCTTTTTGGGTGTAATCTTAGGATTAGGAATAATAATGTAGCAGGAACGGATGGGAGTAGAATTTTGGAGTTGTGTTGGGTAAATTTTTGA 633 0.4013 MKKGEKVLLNIKLEYAFGESGKPSPEDDGVVLKKILKEGEGYEQPNDGAMIQVKLIGKLQDETVFLKKGHDDDQPFEFRIDEEPVIDGLDRAVKNMKKGEIALVIIQLDRMLLVNLLRNWLFTTRKHHKSSVSEQSLSMNNLNFFFPESPSSFSRCLWPTRLVREIAEASFRLGADQPQLILFGCNLRIRNNNVAGTDGSRILELCWVNF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02575 210 Gene3D - 25 111 IPR046357 GO:0003755
Trre15g02575 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 30 107 - -
Trre15g02575 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 48 106 IPR001179 GO:0003755
Trre15g02575 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 42 107 IPR001179 GO:0003755
Trre15g02575 210 SUPERFAMILY FKBP-like 25 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02575 Trre-Chr15 21661534 21664385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02575 1 107 Calmodulin-binding Proteins AT3G25230 37.209 7.42e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02575 K09571 - gmx:100810243 160.999