Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02511 ATGGATTCAAACTCCACCATCAACAATGAAATAGCCATTGATATTACACCAATCTTGAAAGTATACAAAAACGGTCATGTTGAAAATTTAATGAGTCAAGATCAGGTTGTTCCACCATCCCTTGATCCAACAACAAACGTTGAATCAAAAGATGTTATAATCTCCAAAGAACATAACATATCAGCAAGACTTTTCATTCCCAAAAACAATAATTACCCACCAACCCAAAAACAAAAACTCCCTCTCCTTGTTTACTTCCATGGTGGTGGTTTCTGCATCGAAACTCCTTTCTCACCGAATTACCATAACTACCTCAACTCTGTTACTTCACTTGGTAACGTTATTGGTGTCTCTGTTGACTACAGAAGAGCACCAGAAAACCCTGTTCCCACTGCTCATGAAGATTCATGGCTTGCACTCAAATGGGTTGCTTCACATGTTAATGGAAATGGCTCTGATGAATGGTTGAATCAATATGCAGATTTTGAGAAAGTGTTCTTAGGAGGTGACAGTGCTGGTGCTAATATTTCACACTATTTGGGTCTTCGGGTCGGGAAGGAAAAATTAGATGGTGTGAATCTTGAAGGGATTATTTATATTCATCCTTATTTTTGGGGTGTGGATGCAATTGGATCAGAATCGGGTCGAGCTGAATTGGTAGAAAAGATTCATAATTTATGGCGTTTTTCATGTCCAGCCACAAGTGGATCCGACGACCCGTTAATTAACCCGGCTAAGGATCCAAATTTGGGGAGTTTGGGTTGTAAGAGAGTGCTTATTTGTGTTGCTGAGAAAGATATTTGGAGGGATAGGGGTTTGTATTATAAGGAATTGCTTGAAAAAAATGGTTGGGGTGGTGTTGTTCAAGTTGTTGAAACAAAGGATGAGGATCATGTTTTTCATATCTTCAAACCAAGCTGTGAGAATGCTTTGGCCTTTCTTAGCCAAATTGTTTCATTTATCAAAAAGGATTGA 975 0.3877 MDSNSTINNEIAIDITPILKVYKNGHVENLMSQDQVVPPSLDPTTNVESKDVIISKEHNISARLFIPKNNNYPPTQKQKLPLLVYFHGGGFCIETPFSPNYHNYLNSVTSLGNVIGVSVDYRRAPENPVPTAHEDSWLALKWVASHVNGNGSDEWLNQYADFEKVFLGGDSAGANISHYLGLRVGKEKLDGVNLEGIIYIHPYFWGVDAIGSESGRAELVEKIHNLWRFSCPATSGSDDPLINPAKDPNLGSLGCKRVLICVAEKDIWRDRGLYYKELLEKNGWGGVVQVVETKDEDHVFHIFKPSCENALAFLSQIVSFIKKD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02511 324 Pfam alpha/beta hydrolase fold 83 301 IPR013094 GO:0016787
Trre15g02511 324 Coils Coil 318 324 - -
Trre15g02511 324 PANTHER ARYLACETAMIDE DEACETYLASE 16 308 - -
Trre15g02511 324 Gene3D alpha/beta hydrolase 6 323 IPR029058 -
Trre15g02511 324 SUPERFAMILY alpha/beta-Hydrolases 19 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02511 Trre-Chr15 21018071 21019045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02511 7 322 Carbohydrate Esterase AT3G48690 48.457 4.33e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02511 - - cam:101495689 538.88