Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02465 ATGTCTTCTGGTTATTCTATGAACAGTACTTTGTTTTCTCTGTTTCTGTTTGTGCTTGTTGCAAAAGTTAGCTTTTGCTTTTCTACCAAGGTTTATGTAGTTTACATGGGAAGCAAAAGTTGGGAAAACCCAGATGATATTTTGAGGGAAAATCATCAAATACTTGCTTCTGTTCATAGTGGAAGCATTGAAGAAGCACAAGCTTCGCATGTTTATAGCTATAAACATGGTTTCAGAGGCTTTGCAGCTAAGCTTAGTGATGAACAGGCTTCCCAAATTTCTAAAATGGAAGGAGTGGTTTCAGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACACATTCATGGGATTTCATGGGAGTTTTGGATGACCAAACCATGGAAACACTTGGCTACTCTATTACAAACCAAGAAAATATCATCATCGGTTTCATTGATACCGGAATTTGGCCAGAATCTCCAAGTTTCAGTGACACTGACATGCCTGAAGTCCCACAAGGGTGGAAGGGTCGATGTCAATCAGGAGAAGCATTCAATGCCTCAACTTGCAACAGGAAAGTGATAGGAGCAAGATACTATTTGAGTGGATATGAAGCAGAAGAAGAGTCACATGCAAAAGTGTCATTTAAATCAGCTAGGGACAGCGCTGGTCATGGTAGCCATACAGCTTCTATAGCGGCAGGGAGATATGTACAGAACATGAATTATAAAGGATTAGCAAGTGGAGGTGCAAGAGGAGGTGCACCTATGGCTAGGATTGCTGTATACAAATCATGTTGGGATTCAGGTTGCTATGATGTGGACTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGTGTTCACATATTGTCTCTATCACTTGGTGCTCAATCACCACAAGGAGATTATTTCAATGATGCTATATCTATAGGGTCATTTCATGCCGCCAACCGTGGAGTGCTTGTTGTTTCATCTGCTGGAAATGAAGGATATCCTGGTTCTGCTACTAACCTTGCACCATGGATGCTTACTGTTGCTGCTAGCTCAACTGATAGGGATTTCACTTCTGATATCATATTAGGAAATGGTGCTAAAATCACGGGTGAAAGTCTAAGTCTCTTTGAAATGAATGCATCCGCAAGGATAATTTCAGCTTCTGAAGCATTTGCAGGATACTTCACTCCTTATCAATCCAGTTACTGTTTAGAGAGTTCTTTGAATAAAACAAAGACCAAAGGGAAGATTCTAGTTTGTAGACATGTAGAGAGGTCAACAGAATCAAAAGTTAAAAAGAGCAAGATAGTTAAAGAAGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCTGTCCCATTTGTGATCCCTTCTGCTATTGTTGGAACGAAAAAAGGAGAAAATATTCTATCGTATATCAAGACTACACGTAAGCCTATGTCAAGGATATTAGGAGCAAAGGCAGTAATTGGAGCGCAACCTGCACCACGTGTAGCAGCATTTTCTTCCAAGGGTCCTAATGCTTTAAACCCTGAAATTTTGAAGCCTGATGTTACGGCTCCAGGACTAAATATTCTAGCAGCATGGTCTCCGGCAGCTGGAAACATGTTCAACATTCTCTCGGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTGGTCAAAGCTGTCCATCCTTCATGGTCTCCTTCTGCTATCAAATCTGCCATCATGACAACTGCTACAATCCTAGATAAACATCACAGACCGATCAGCGTAGATCCAGAACAACGAAGGGCTAATGCATTTGATTATGGATCAGGATTTTTGAACCCTTTAAGAGTTCTTAACCCTGGTCTTATCTATGATTCCGAGCCAACAGATTTCGTTACATTCCTATGTTCACTTGGTTATGATCAAAGATCACTCCATCTTGTTACTAGAAACAATAAAACATGTAAAAGCAAATTCACCACTGCATCAAACCTTAACTATCCATCCATTGCAGTTCCAAATCTCGAAGACAAATTTTCAGTTACAAGGATTGTGACAAATGTTGGAAAACCAACAAGTATATATAAATCTGTAGTTTCTCCACCACCTGGTGTTAATGTCACTGTCACGCCGAACCGGTTAGTGTTCACAAGAATTGGGCAGAAAATCAAGTTCAGTGTGAATTTCAAAGTAACTTCTTATCCTTCAAAAGGATACAAATTTGGATTCTTGTCATGGACAAATAGAAGGTTACAAGTTACTAGTCCTTTGGTTGTAAAGGTTGGTTAG 2262 0.3992 MSSGYSMNSTLFSLFLFVLVAKVSFCFSTKVYVVYMGSKSWENPDDILRENHQILASVHSGSIEEAQASHVYSYKHGFRGFAAKLSDEQASQISKMEGVVSVFPNSKRKLHTTHSWDFMGVLDDQTMETLGYSITNQENIIIGFIDTGIWPESPSFSDTDMPEVPQGWKGRCQSGEAFNASTCNRKVIGARYYLSGYEAEEESHAKVSFKSARDSAGHGSHTASIAAGRYVQNMNYKGLASGGARGGAPMARIAVYKSCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISIGSFHAANRGVLVVSSAGNEGYPGSATNLAPWMLTVAASSTDRDFTSDIILGNGAKITGESLSLFEMNASARIISASEAFAGYFTPYQSSYCLESSLNKTKTKGKILVCRHVERSTESKVKKSKIVKEAGGVGMILIDETDQDVAVPFVIPSAIVGTKKGENILSYIKTTRKPMSRILGAKAVIGAQPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPISVDPEQRRANAFDYGSGFLNPLRVLNPGLIYDSEPTDFVTFLCSLGYDQRSLHLVTRNNKTCKSKFTTASNLNYPSIAVPNLEDKFSVTRIVTNVGKPTSIYKSVVSPPPGVNVTVTPNRLVFTRIGQKIKFSVNFKVTSYPSKGYKFGFLSWTNRRLQVTSPLVVKVG 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02465 753 CDD PA_subtilisin_like 351 480 - -
Trre15g02465 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Trre15g02465 753 FunFam Subtilisin-like protease SBT1.5 626 753 - -
Trre15g02465 753 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Trre15g02465 753 ProSiteProfiles Serine proteases, subtilase domain profile. 115 609 - -
Trre15g02465 753 FunFam subtilisin-like protease SBT1.5 345 487 - -
Trre15g02465 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 111 IPR037045 -
Trre15g02465 753 Pfam Fibronectin type-III domain 655 750 IPR041469 -
Trre15g02465 753 Gene3D - 345 487 - -
Trre15g02465 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 750 IPR045051 -
Trre15g02465 753 Pfam PA domain 383 466 IPR003137 -
Trre15g02465 753 FunFam Subtilisin-like protease SBT1.5 139 354 - -
Trre15g02465 753 Gene3D Peptidase S8/S53 domain 139 622 IPR036852 GO:0004252|GO:0006508
Trre15g02465 753 Pfam Subtilase family 138 577 IPR000209 GO:0006508|GO:0008236
Trre15g02465 753 CDD Peptidases_S8_3 109 575 IPR034197 -
Trre15g02465 753 Gene3D - 626 752 - -
Trre15g02465 753 FunFam Subtilisin-like protease SBT5.3 21 111 - -
Trre15g02465 753 SUPERFAMILY Subtilisin-like 110 613 IPR036852 GO:0004252|GO:0006508
Trre15g02465 753 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Trre15g02465 753 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Trre15g02465 753 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02465 Trre-Chr15 20518970 20524039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02465 32 752 Subtilisin-like Serine Gene Family AT2G04160 43.542 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02465 - - gmx:100808547 1282.32