Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02462 ATGGTCTTTGGCAAAACCTCCGGCGCCAAAAGCAACCTCCGAATCTCATCTTCTCTTCAAGATCTCACCTCTTACCGCAAAATCGATCCACAGTATCCAATCGCAACCGTCAATTCAATCAACCAACAACAACAGCAGCAGCAACAGCTTCTTCAGAACTCAACTTTCTCCAAAACCAAACCAACCCAAATTCCAAACCCGACCCGTAAAAAATGTTGCAAACCCATCGCTTTCATCCTATGCTTCCTCATTTTCATTCTCATCCTATACGCCATTTCAACTCTCGTTTATTCTCATCGAAATTCAGGTAAATACTACGTCGTTTTGGATTCTGGTAGTACTGGAACTCGTGTTTACGTTTACAAAGCTGAAATTGAACAAAAATCACAAGATAGTTCAATTCCGATTTCGGTTACTTCCTTGAGAAACGGTTTACAGAAAAAACGCGGTTCACAAAGTGGTCGTGCTTATGATAGAATGGAAACTGAACCGGGTCTTGATAAACTGGTTCATAATGTAACCGGTTTAAAAACTGCTTTGAAACCGCTTATTAAATGGGCTATGAAACAGATTCCAGAAAATTATCATAAAAGCACTTCGCTTTTTCTTTATGCTACTGCTGGTGTTAGAAGGTTACCAAATGAGGATTCAAAATGGTTACTTGATAATGCTTGGAATGTTCTTAAAGGTTATTCTTTTATTTGTAGGAAAGATTGGGTTAAGATTATTAGTGGGACTGAAGAAGCTTATTTTGGGTGGATTGCATTGAATTATGATAGTGGTATTTTGGGTGTTAAACCTAGGAAAGATACTTATGGTGCACTTGATTTAGGTGGGTCTTCTTTGCAGGTTACTTTTGAAGGTGATCAAAATTTGAATAGTGAAACTAGTTTGTTTGTTAGGATTGGTTCCGTTAATCATCATTTAACTGCTTATTCTTTAGCTGGGTATGGTCTTAATGAAGCTTTTGATAAATCTGTTGCTTATGTTTTTAAGAAAAATAAACTTGGTTTAGGTGGGACTGTTAAACATCCTTGTTTGCAAAATGGGTATAAGAGTCAATATACGTGTTCTCGTTGTTTGGCTGTTGAGAAAGAAAAGGAAGTGGAGAGTCCTAAAGTTAATGGGAGTGTGAATGCTGTTGGTGGTGGGAAAGGAGTGTTGAAAACGCCAGTGAGGCTTGTTGGTGCGCCCAATTGGCAAGAGTGTAGTGCCATTGCTAAGGCTGCTGTTAATTTGTCTGAATGGTCTGATGTTGGTCAGGGTCTTGATTGTGAAGTGAATCCTTGTGCTTTGCGTGAGAGTCTTCCTCGCCCGTTAGGTCATTTTTATGTGATTTCTGGATTTTTCGTGGTGTATAGGTTTTTCAATTTGACTTCTGAGGCTACTATTGATGATGTGTTGGAAAAGGGTAGGGAATTTTGTGAAAAAAAATGGGATGTTGCTAAGAAAAGTGTTGCTCCACAGCCCTTTATTGAGCAGTATTGTTTCAGGGCACCTTATGTTGCTTCTTTGCTGAGAGAGGGTTTGCATATTACTGATAGACATATAACTGTTGGCTCTGGAAGCATCACTTGGACACTTGGGGTGGCTCTGTTGGAAGCTGGGAAGTCTTATTCGACCAGATTTGGTCTTCAGGGATTTGACTTGGTTCAGATGAAGATGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTTATTCTTTTATGTTGCGCTTTATCATGTGTCCTCAAATGGGTGCCGAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACAACCCGTCCAGTGCATCTGTTCTTAAGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAATCAAGAATAAAGACGCCACTCAGCCCAACAATCGCAGGTTCACAAGATAGACCGTTTAGCTTGGGACATGGCCTTGGTGATAACAGTGGCGGCATCCAGCTGATGGAATCTTCTTTTTACCCGGCAGCTAGTAGTGTCTCACACAGTTATTCCTCTACCAATTTAATGCAAATGCCATTTGAGAGTAATAATATAGGGACCTTCTGGCCGCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGAAGATCACAATCTCGAGAAGACTTGAGTTCATCAGTGGCTGATGCACACATAGCGAAGGTTTAG 2169 0.4048 MVFGKTSGAKSNLRISSSLQDLTSYRKIDPQYPIATVNSINQQQQQQQQLLQNSTFSKTKPTQIPNPTRKKCCKPIAFILCFLIFILILYAISTLVYSHRNSGKYYVVLDSGSTGTRVYVYKAEIEQKSQDSSIPISVTSLRNGLQKKRGSQSGRAYDRMETEPGLDKLVHNVTGLKTALKPLIKWAMKQIPENYHKSTSLFLYATAGVRRLPNEDSKWLLDNAWNVLKGYSFICRKDWVKIISGTEEAYFGWIALNYDSGILGVKPRKDTYGALDLGGSSLQVTFEGDQNLNSETSLFVRIGSVNHHLTAYSLAGYGLNEAFDKSVAYVFKKNKLGLGGTVKHPCLQNGYKSQYTCSRCLAVEKEKEVESPKVNGSVNAVGGGKGVLKTPVRLVGAPNWQECSAIAKAAVNLSEWSDVGQGLDCEVNPCALRESLPRPLGHFYVISGFFVVYRFFNLTSEATIDDVLEKGREFCEKKWDVAKKSVAPQPFIEQYCFRAPYVASLLREGLHITDRHITVGSGSITWTLGVALLEAGKSYSTRFGLQGFDLVQMKMNPLILIPILLLSLILLCCALSCVLKWVPRFFRRQYLPLFRHNNPSSASVLKSPLWFKSWSPIISGESRIKTPLSPTIAGSQDRPFSLGHGLGDNSGGIQLMESSFYPAASSVSHSYSSTNLMQMPFESNNIGTFWPPHRSQMRLQSRRSQSREDLSSSVADAHIAKV 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02462 722 Gene3D Exopolyphosphatase. Domain 2 245 521 - -
Trre15g02462 722 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 79 537 IPR000407 GO:0016787
Trre15g02462 722 Gene3D - 96 244 - -
Trre15g02462 722 MobiDBLite consensus disorder prediction 695 722 - -
Trre15g02462 722 Pfam GDA1/CD39 (nucleoside phosphatase) family 100 534 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02462 Trre-Chr15 20488551 20493455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02462 8 722 Nodulin-like Gene Family AT4G19180 56.361 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02462 - - lja:Lj0g3v0174799.1 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01486 9 12712939 12715679 Trre15g02462 15 20488551 20493455 PCT