Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02461 ATGGTAGTTGGAAATGGTGATATATGGAAAGCTCATACGGCTATGGCAATTGTGCAGTTATTTACCGGTGGTTATCACGTTATTACAAAATTGGCTCTTAATGTTGGAGTTAACCAAATTGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCTATTGCTTTTTTTCGTGAAAGACGTACACGGCCACCCCTAACCAAACGCTTTGTGACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTATTTCTTATTGGTTTGAGCTATACTACTCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTATTTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTTGCCAAGGTTGGAGGAATTTTTGTCTGTGTTATGGGTGCTTTGGTGATGGTTTTGTTCCGTGGTCCAGCACTTGTAGGGTCTTCAGAAATGGACCTTATATCGCACAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGAACTTGGATTAGACCATTTTCATGTTGGAGTTTTGTGCTTCATAGGAAATTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAGCCTATCTGTCACAGCGTATTCTTACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTTGTGACCGACGAGTCAACTGATTGGAGTTTGACACAGTCTGAAACATTTGCCGTTTTATATGCTGGGATTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATCTTAGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCAGCGGCTCTCCTATCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGTGTCTTAGGTGGATCTCTGATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTTCTCATCATGTCTCGAAATGGGAATATCTTCGCAAGACTTCGTTTCCTAGAATTAATATTTTCTCAGGCTCCTCTAGCTCAAAGCCTACGGATTGA 1146 0.4049 MVVGNGDIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPATPVFTFILAIMMGTERVNLLRYEGLAKVGGIFVCVMGALVMVLFRGPALVGSSEMDLISHSEISARGQPEPSGWLVSGLMELGLDHFHVGVLCFIGNCMCMATFLSIQAPLLKKYPASLSVTAYSYFFGALLMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVISHHVSKWEYLRKTSFPRINIFSGSSSSKPTD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02461 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 341 - -
Trre15g02461 381 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
Trre15g02461 381 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
Trre15g02461 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Trre15g02461 381 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02461 Trre-Chr15 20480348 20485674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02461 94 344 Nodulin-like Gene Family AT5G45370 67.331 6.12e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02461 - - gmx:100809051 630.557