Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02456 ATGGAAATTACTACTTTGTTTTGGTATTTTGCTTCTTTTCTCTTCATTGTTTTGTTCAAATCACTCATCAAATCTTTCTTATTTCCTTCTAATGGAAAACAATTGCCACTCCCTCCTGGCTCTATGGGTTACCCTTACATAGGTGAAACTTTCCAAATGTATTCTCAAGACCCTAGTCTTTTCTTTGCCAACAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCAGCAAAATTTGTGTTAAACAAAGCTCAACTTTTCAAACCAACATTTCCAGCTAGCAAAGAAAGGATGTTAGGAAAACAAGCAATTTTCTTTCATCAAGGAAATTACCATGCTAACCTTAGAAGACTTGTTCTTCGCACCTTCATGCCTGAAGCTATCAAAAGCATTGTTCCTAACATTGAATCCATTGCTCAGAGCTGTCTCAAATCATGGGAGGGAAATTTAATTACCACTTATCTTGAAATGAAAACATTCACCTTCAACGTAGCACTTCTATCAATTTTTGGAAAAGATGAAATTCTATACAGAGAAGATCTAAAAAGATGTTACTACACACTTGAGAAAGGGTACAATTCAATGCCAATAAATCTTCCAGGAACACTTTTCAACAAAGCAATGAAGGCAAGGAAAGAGCTTGCACAGATCTTAGAACAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGAATACAATGATTTATTAGGTTCATTCATGGATGAAAAAGCAGGACTCAGTGATGAACAAATATCAGATAATATCATTGGTGTTATTTTTGCTGCTAGAGATACAACTGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTTCAATCAGTCACAGAAGAACAAATGTCTATAATAAAGGAGAAACAGATAAATGGTGAAGAAATTGGTCTAAAATGGGAAGACACAAAAAATATGCCAATAACTTCAAGGGTCATACAAGAGACTCTAAGAGTAGCATCAATTTTGTCTTTTACTTTTAGAGAAGCAACAGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGATGGAAAGTATTGCCACTTTTTAGAAACATACATCACAGTCCAGAAAATTTCAAAGAGCCAGAAAAATTTGATCCTTCAAGATTTGAGGTTACTCCAAAACCTAATACTTTCATGCCATTTGGAAATGGGACCCATGCTTGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTTTTTGTACATCATCTAACCACAAAGTACAGATGGTCAGTGGTCGGTGAAAAAAATGGAATTCAATATGGTCCTTTTGCTCTTCCACAAAATGGTTTACCAATCAACTTATATTCCAAGAAATAG 1401 0.3526 MEITTLFWYFASFLFIVLFKSLIKSFLFPSNGKQLPLPPGSMGYPYIGETFQMYSQDPSLFFANKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGNYHANLRRLVLRTFMPEAIKSIVPNIESIAQSCLKSWEGNLITTYLEMKTFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFNKAMKARKELAQILEQIISTRRCKKQEYNDLLGSFMDEKAGLSDEQISDNIIGVIFAARDTTASVLTWIVKYLGENPSVLQSVTEEQMSIIKEKQINGEEIGLKWEDTKNMPITSRVIQETLRVASILSFTFREATEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPEKFDPSRFEVTPKPNTFMPFGNGTHACPGNELAKLEILVFVHHLTTKYRWSVVGEKNGIQYGPFALPQNGLPINLYSKK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02456 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 SUPERFAMILY Cytochrome P450 33 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Trre15g02456 466 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 Pfam Cytochrome P450 38 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02456 466 CDD CYP90-like 66 462 - -
Trre15g02456 466 PANTHER CYTOCHROME P450 26 34 442 - -
Trre15g02456 466 FunFam Abscisic acid 8 28 464 - -
Trre15g02456 466 Gene3D Cytochrome P450 28 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02456 Trre-Chr15 20396066 20398959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02456 1 460 Cytochrome P450 AT4G19230 71.274 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02456 K09843 - gmx:100170674 802.357