Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02438 ATGGATAGTTCAATTACCATTCAATGGTTAAACACTCTTCTACTATTTGCACTGCTATTACTTAAGACACAAGGACAGTTTGTTCCAATAACTCGGCTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCTCCAGCTTATCATTTTAATGAAGGACATGAAGATGGAGTTCACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTAACATATTGCCTTTATCGTAAGGACAGTCGATTAGGTTCATCGAATCAAATGGAAGAGCAAACTTATTTTTCTGGATATTTAAGTGATAACCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGAGATTGAAGAAGTTGATCCAGAGACAAATTTGCACTACAGAGGACAAAGGATTTTTAATGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATAATTTCTGGATGTTCTGCTGGAGGATTAGCTGCAATATTACACTGTGATGGATTTAGAGAACTATTACCTAATGGAACTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTATTAATGTAAAGGATATCTCAGGAGATTATTATATTGAAGATTATTACAGTCAAGTTGTTGAAACACATGGCTCGGACAAGAATTTGCCACAAACCTGCACTTCAAAACTCAGTCCAGGACTTTGCTTTTTTCCTCAATATATGGCATCAAGTATCAGAACACCACTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGCCGCTGATCCGAATGGCCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAATTAAATATAATGCAAGACTATAGGGCACAATTCTTGGAGGCATTGAGTCCTATAAACAACTCTTCATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAGGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCCCGTGAGATAGATTGCACATACCCTTGTAACCCTACTTGTCAGAACCGTGTTTTGGATGTTGCAGCCTACCCTGGAATACACTAG 1206 0.3872 MDSSITIQWLNTLLLFALLLLKTQGQFVPITRLESAVSKGAVCLDGSPPAYHFNEGHEDGVHNWIVHIEGGGWCHNVTYCLYRKDSRLGSSNQMEEQTYFSGYLSDNQQYNPDFYNWNRVKIRYCDGSSFTGEIEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENAIISGCSAGGLAAILHCDGFRELLPNGTKVKCVSDAGYFINVKDISGDYYIEDYYSQVVETHGSDKNLPQTCTSKLSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGAADPNGQWSSCKTNLNNCSPEQLNIMQDYRAQFLEALSPINNSSSNGMFIDSCYVHCQTEPQDTWFTRDSPMVGNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNRVLDVAAYPGIH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02438 401 PANTHER NOTUM-RELATED 14 389 IPR004963 GO:0016787
Trre15g02438 401 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02438 Trre-Chr15 20248074 20251021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02438 8 400 Carbohydrate Esterase AT4G19420 56.308 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02438 K19882 - gmx:100780707 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02438 15 20248074 20251021 Trre15g02438 15 20248074 20251021 ECH
Trre9g01586 9 13831363 13838255 Trre15g02438 15 20248074 20251021 PCT