Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02437 ATGCACCAATTGTTAAGTGTTGTGATATGTACACTGATATTACTAAAATCAGCTGAAGGGGTTGCTGTGCCAATCACTTATGTTCAAAGTGCTGTTGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGAAGGTGGTATTGACAACTGGATTGTTCATTTTGAGGGAGGAGGATGGTGCAACAATGCCACTACTTGCCTTGACCGAGTTAACACTCGTTTAGGATCATCGAAGAAAATGGATACGACACTTTCCTTTTCGGGATTTTTTAGCCCTGGGAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGACGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCCATTTTACAATGCGATCGCTTCAAAACTTTACTACCTTCAGGAGCTAAAGTTAAATGTGTCTCAGATGCCGGTTATTTTATCAATGTAAAGTCTGTCTCTGGATCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCATGGCTCAGCAAAGAATTTGCCTTCATCTTGCACTTCAAGACTCCCACCAGGGCTGTGTTTTTTCCCCGAAAACGTGGCCGCACAAATCAGGACTCCAATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAGATTAAGAACATTTTGGCACCCGGTGTTGCTGATCCCCATGGCACTTGGAGAAACTGCAAACTTGATATAACCAAATGTTCCTCTAATCAATTAGCTACAATGCAAGGTTTTAGGACAGATTTCTTAAAGGCAATTAGTGTGATTAGTAACTCTCCATCTAAAGGAGCATTTATAGATGGTTGCTATTCCCACTGCCAAACTGGAATTCAAGAAACATGGATGAGAAATGACTCTCCAGTGCTGGCCAAGACAACAATAGCAAAGGCAGTAGGAGATTGGTATTATGAAAGAAGGACTTTTCATGAGATAGATTGTCCTTATCCTTGCAACCCTACTTGTCATAACCGTGTTTTTGATTAA 1167 0.401 MHQLLSVVICTLILLKSAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEGGIDNWIVHFEGGGWCNNATTCLDRVNTRLGSSKKMDTTLSFSGFFSPGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPSGAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPENVAAQIRTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDITKCSSNQLATMQGFRTDFLKAISVISNSPSKGAFIDGCYSHCQTGIQETWMRNDSPVLAKTTIAKAVGDWYYERRTFHEIDCPYPCNPTCHNRVFD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02437 388 PANTHER NOTUM-RELATED 12 384 IPR004963 GO:0016787
Trre15g02437 388 Pfam Pectinacetylesterase 17 368 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02437 Trre-Chr15 20236843 20240619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02437 1 387 Carbohydrate Esterase AT4G19420 57.346 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02437 K19882 - gmx:100781246 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02437 15 20236843 20240619 Trre9g01586 9 13831363 13838255 PCT