Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02436 ATGGAGCAATTGTTAAGTCTTGTGATATGTACACTGCTATTACTAAAAGCAGCTGAAGGGGTTGCTGTGCCAATCACTTATGTTCAAAGTGCTGTTGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGATGGCATTGACAACTGGATTGTTCATTTTGAGGGAGGAGCATGGTGCAATAATGCCACTACTTGCCTTGAACGGACGAACACTAATAGAGGATCATCGAAGAAAATGGAAACGACGCTTATCTTTTCTGGATTTTTTAGTAACAACAAAACGTTTAATCCAGATTTCTACAATTGGAACAGAATCCAGGTTAGGTATTGTGACGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAGAAACCAATTTGCATTATAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTATCCATGGATGTTCAGCTGGAGGATTAACTACTATTTTACATTGCGATCGCTTCAAAACTTTACTACCTTCAGCAGCTAAAGTTAAATGCGTCTCAGATGCCGGTTATTTTATCAATGTAAAATCTATCTTTGGATCACCACACATTGAACAATTCTACAGTGAAGTTGTTCAAACTCATGGTTCAGCAAGGAATTTGCCTTCATCTTGCACTTCAAGACTCCCACCAGGGTTGTGTTTTTTCCCCGAAAACGTGGCTGCACAAATCAGGACTCCGATTTTCTTTGTAAATGCTGCCTATGATTCATGGCAGATTAGGCACATTTTAGCACCCGGTGTTGCTGATCCCAATAGGACTTGGAAGAACTGCAAAATTGATATAACCAAATGTTCACCTAATCAATTAACCACAATACAAGGTTTTAGGACAGATTTCTTAAAGGCAATTAGTGTGATTAATAACTGTCCATCTAAAGGAGCATTTATAGATAGTTGCTATTCCCACTGCCAAACTGGAAATCAGGAAACATGGATGAGTAATGATTCTCCAGTAGTGGCCAATACTACAATAGCAAAGGCAATAGGAGATTGGTATTTTGAGAGAAGGACTTTTAATCAGATAGATTGTCCTTACCCTTGCAACCCTACATGTCATAACTCATAA 1158 0.3895 MEQLLSLVICTLLLLKAAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEDGIDNWIVHFEGGAWCNNATTCLERTNTNRGSSKKMETTLIFSGFFSNNKTFNPDFYNWNRIQVRYCDGSSFTGDVEAVDPETNLHYRGGRIFVAVIEDLLAKGMKNAKNAIIHGCSAGGLTTILHCDRFKTLLPSAAKVKCVSDAGYFINVKSIFGSPHIEQFYSEVVQTHGSARNLPSSCTSRLPPGLCFFPENVAAQIRTPIFFVNAAYDSWQIRHILAPGVADPNRTWKNCKIDITKCSPNQLTTIQGFRTDFLKAISVINNCPSKGAFIDSCYSHCQTGNQETWMSNDSPVVANTTIAKAIGDWYFERRTFNQIDCPYPCNPTCHNS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02436 385 SUPERFAMILY alpha/beta-Hydrolases 118 276 IPR029058 -
Trre15g02436 385 PANTHER NOTUM-RELATED 12 384 IPR004963 GO:0016787
Trre15g02436 385 Pfam Pectinacetylesterase 18 368 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02436 Trre-Chr15 20229169 20232705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02436 1 384 Carbohydrate Esterase AT4G19420 52.983 3.65e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02436 K19882 - gmx:100781246 617.461