Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02432 ATGAGGCCACGCAACAATAACACCAACAACAATAACAGATTCATTTTCAATTTCAACAACAACCATTATTCAAGCATCACCGAATCACGGCGACGAAGAATCGCGTTTCCGAAGCGATTATTACTTGATTTAATGGCGGGACAATCAAGGAAATGGATGATCCTTGTTGTTACGATATGGATTCAAGCATTTACAGGAACCAATTTTGATTTCTCTCAATATTCATCGTCGTTGAAATCTGCGCTTGAGATTTCTCAGGTTCAGCTTAATTACTTAGCTACTGCGAATGATATGGGAAAGGTTTTTGGTTGGTCTTCTGGTTTAGCTCTAATGCATCTTCCTGTTTCGGTTGTTATGTTTATTGCTGCTTTTATGGGTTTTCTTGGTTATGGTCTTCAATGGCTTCTTATCAATCATCTCATCTCTTTGCCTTATTTTCTGGTGTTTCTTCTGTGTCTTTTAAGTGGCTGCAGCATCTGCTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTTCCTATTAACCGAACACTTGCGTTGTCACTTACTGTGAGTTTCAATGGTGTTAGTGCAGCCCTTTACACCCTTGCTGCCAATTCAATAGACCCTTTGTCTGATTCACTGTATCTTCTTTTGAATGCTCTTGTTCCCCTTCTTGTTTGCATTGCAGCAGTTATTCCGATTCTTCGCCAACCACCTTTAGATCCTCTCCCTCCTGCTGTAGTTAACCGGGACTCACTAATATTTTTAATCTTGAACTTCTTAGCCATTTTCACTGGCCTTTATCTACTCTTGTTTGGCGCATCTGCTTCTTCTGTGGCTTCATCTCGGCTCCACTTTGGTGCAACTATTCTTCTCCTCACCCTCCCGTTGTTTATTCCTGGCATTATATATGCTCGTTCGTGGGCTCAGCGTACCATCCATTCCAGCTTTCGGATAGAAGGATCAAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCATAAAGAACTACTTAGTCGTCACGGTAGTCTTGTTGGTAATGGAGATGATGGCAATGGAGATGGTTACAGCCTGCAAAGTGACAATGGATCCATGTTTTCAAGTCGGAAGGACAGCGTTAATGATGTGTGTTGTGAAAGGATGATTGGCCAGGATCAGTTGACAATGCTAGGAGAAGAGCACTCAGCTGCAGTGCTTGTCCGAAGATCAGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAAATTGCTCAATCTTTAGGCCTGCGTTCAAGTACTTCTACCCTTGTTACTCTATATGCATCCTTTTCGTTTTTTGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGCTGGCTCTCCGTCGCACTTATACCCACACCAATTGCGTTCTTCTTGCTCGCTGCATCAGGCACTTCTCTGGCTCTGCATACAGGCACTGCACTAATAGGGTTGAGTTCTGGCTTCATATTTGCAGCTGCTGTATCAGTTACATCTGAACTGTTTGGACCCAACAGTGTAGGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGTTCGCTTCTCTATGGTTTTCTTGCCGCACTAGTTTATGATGCCAATGCAGAGTCAACACCGGGAAACTTTACAACGTCTGACTCAGTAGTATGCATGGGAAGGCAATGCTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGGTTCTAGTATGCTGTTATTCTTAAGAACCAAACATGCATATGAACATTTTGAGAAACACCGTATGTCGACGCAAGTTATCGTGTCTTAA 1866 0.4223 MRPRNNNTNNNNRFIFNFNNNHYSSITESRRRRIAFPKRLLLDLMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKSALEISQVQLNYLATANDMGKVFGWSSGLALMHLPVSVVMFIAAFMGFLGYGLQWLLINHLISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPINRTLALSLTVSFNGVSAALYTLAANSIDPLSDSLYLLLNALVPLLVCIAAVIPILRQPPLDPLPPAVVNRDSLIFLILNFLAIFTGLYLLLFGASASSVASSRLHFGATILLLTLPLFIPGIIYARSWAQRTIHSSFRIEGSSFILVHDDDLELHKELLSRHGSLVGNGDDGNGDGYSLQSDNGSMFSSRKDSVNDVCCERMIGQDQLTMLGEEHSAAVLVRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLRSSTSTLVTLYASFSFFGRLLSAVPDYIRSKFYFARTGWLSVALIPTPIAFFLLAASGTSLALHTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAESTPGNFTTSDSVVCMGRQCYFWTFVWWGCISVLGLGSSMLLFLRTKHAYEHFEKHRMSTQVIVS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02432 621 SUPERFAMILY MFS general substrate transporter 391 604 IPR036259 -
Trre15g02432 621 Gene3D MFS general substrate transporter like domains 397 612 IPR036259 -
Trre15g02432 621 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 52 607 - -
Trre15g02432 621 Pfam Nodulin-like 51 296 IPR010658 -
Trre15g02432 621 SUPERFAMILY MFS general substrate transporter 47 300 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02432 Trre-Chr15 20193207 20198833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02432 1 615 Nodulin-like Gene Family AT1G31470 54.428 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02432 - - cam:101496594 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02432 15 20193207 20198833 Trre15g02432 15 20193207 20198833 ECH
Trre9g01593 9 13949268 13953446 Trre15g02432 15 20193207 20198833 PCT