Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02416 ATGATATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTCGGCAAGGATGAAGATCTATATACCTTTTTTGAGCCGGATCTTCCATCTATTGGTGTGAGTCTTCCACGAAGTAAGTCAACATCAGAAGCAGTTAAGTTTCCTGCTGAGAAGAAGCCAGCTTTAAAGATTCCAGCTAGTAGTAAAAATGGACCAAAATCATTATCTCAAAATAAGGTACAAAAACCAGTCTCAAATTCTGATCAAAAGAAAACAAATAATCAAATTTGCAGTACAACACGACGGCCTGCTCAAGAAAATACATCATGGAATGTCCTTGACCTCAAGAAAGATAATTACTTCTCATGCTCTGTTGGGAGAAACCGAACTAATGCTCGGTATACTCTTGCCTCACCGGATCATGTTGTAGAGTTTCTGATGGAACTAGCGGATGCATTACCGCACTCTTTACTACAAAGTTAA 465 0.3806 MISPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPRSKSTSEAVKFPAEKKPALKIPASSKNGPKSLSQNKVQKPVSNSDQKKTNNQICSTTRRPAQENTSWNVLDLKKDNYFSCSVGRNRTNARYTLASPDHVVEFLMELADALPHSLLQS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02416 154 MobiDBLite consensus disorder prediction 55 97 - -
Trre15g02416 154 MobiDBLite consensus disorder prediction 63 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02416 Trre-Chr15 20037593 20038152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02416 1 145 Trehalose Biosynthesis Gene Families AT1G78580 49.677 1.59e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02416 K16055 - gmx:100797320 211.846