Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02393 ATGGAGTACCGACCTCTCTTGTTTGTTCTCTTCACTGCTCTTCTAGTCTCAACTCCTCAAGCCTTGAAACTGGACGTTGGTGGAACTGATGGTTGGACTCTAAACCCTTCTGAGAATTACAACAGCTGGTCTGGAAGGAACAGGTTCCTAATCAATGACGTTATAGTTTTCAAATACAAGAAGGGTTCAGATTCAGTGTTGGAAGTAAAGAAAGAAGATTATGAAAAGTGTAACAAAACAAACCCAATCAAGAAATTTGAAGATGGTGAAACAGAGTTCACTTTGGATAGAGCAGGACCATTTTATTTCATCAGTGGAAAAGATGAAAATTGTGAAAAGGGTCAGAAATTAACACTTGTTGTTATATCCCCACGTAAAAACACATCACCCTCTGTTCCTACTCCATCATCATCACCACCATCACCCTCTGTACCAGCTGGTGGACCTAAGGCTTCATCTCCTCCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCTCCAGTGACCACACCTCCAGCCAGTGGACCTAAGGCTTCAACTCCCTCTCCGGTTAGCACATCTCCATCTCCAACTTCAGTGAGTACACCGCCAGCCGGTGGACCTACTGCTTCATCTCCATCTCCATCTCCATTTTCAGTGAGTACACCTCCAGCCGGTGGACCTACTGCTTCATCTCCATCTCCATCTCCATTTTCAGTCAGTACACCTCCGGCCGGTGGACCTACAGGTTCCTCCTCTCCTACTGGTGCTCCCATGGCCGGTGGACCATCAGGGTCTCTTGCACCAGGACCAGGAGGTGTACCAACATCTCAATCTCCAGGGAGTTCTACAGATGCAAAGGCACCGTCGAGCAGTGGCTCATATGTTGGTCCTTCGAGCTTTGTGGTGTGTTCCATTGCTGTTGTTGTTGGTGCTCTGTTTTTGAGTTATTGA 948 0.4747 MEYRPLLFVLFTALLVSTPQALKLDVGGTDGWTLNPSENYNSWSGRNRFLINDVIVFKYKKGSDSVLEVKKEDYEKCNKTNPIKKFEDGETEFTLDRAGPFYFISGKDENCEKGQKLTLVVISPRKNTSPSVPTPSSSPPSPSVPAGGPKASSPPSVSTPPAGGPTTSPPSPVTTPPASGPKASTPSPVSTSPSPTSVSTPPAGGPTASSPSPSPFSVSTPPAGGPTASSPSPSPFSVSTPPAGGPTGSSSPTGAPMAGGPSGSLAPGPGGVPTSQSPGSSTDAKAPSSSGSYVGPSSFVVCSIAVVVGALFLSY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02393 315 SUPERFAMILY Cupredoxins 21 122 IPR008972 -
Trre15g02393 315 ProSiteProfiles Phytocyanin domain profile. 22 123 IPR003245 GO:0009055
Trre15g02393 315 MobiDBLite consensus disorder prediction 184 214 - -
Trre15g02393 315 Gene3D - 21 125 IPR008972 -
Trre15g02393 315 PANTHER BLUE COPPER PROTEIN 23 165 IPR039391 GO:0009055
Trre15g02393 315 Pfam Plastocyanin-like domain 32 115 IPR003245 GO:0009055
Trre15g02393 315 MobiDBLite consensus disorder prediction 133 183 - -
Trre15g02393 315 FunFam Early nodulin-like protein 1 21 126 - -
Trre15g02393 315 MobiDBLite consensus disorder prediction 124 295 - -
Trre15g02393 315 MobiDBLite consensus disorder prediction 241 257 - -
Trre15g02393 315 MobiDBLite consensus disorder prediction 269 295 - -
Trre15g02393 315 CDD OsENODL1_like 23 122 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02393 Trre-Chr15 19765496 19766992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02393 6 185 Phytocyanin Superfamily AT5G53870 46.073 7.28e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02393 - - cam:101497669 210.69