Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02381 ATGGCATTGGGTTCAACTTTCGTTTCCTTGCCAATATTTTTATTCATTTATCTCAATTTGTTTTACGTGAACGCAACATCCTACAAAGAGTTGCTACTAATGGGGCAATCAGTTAGAAGTTCAGACACATTTCTTTCAAATGGTGGAAACTACGAACTGGGATTTTTTACCAGAAAGAGAGAGAACTCGACCAAGTATTATGTTGGTATATGGTCTAAAAAGGTACCACATGACAAGATTGTTTGGGTTGCCAACAGAGATTACTCTTTACAAACATCATCAGCGTTTCTTACCATTCAACCTGATGATGGTAATATTGTCATTATAGATGGAGCAGTGACATACCACGTTAGTCGCGTTGCAAAAAAAAACGTTAGTACCTATGTAACACTGTTGGAGACAGGAAACTTGGTACTGGTGAGTAACTCTAACCAAGAGATTTTATGGCAGAGTTTTAATTACCCCACGGATACCCTTTTACCCGGAATGAACATAGGACACGATATTGACACAGGATACACTTGGTCATTGAGATCATGGACAAGTGTAGACGACCCTTCTCCGGGTCCATATACACTCCAATATAATTCTGGCTTTGCGAGTTTAACAGTGAACAAAGGTTCTAATGTGTTGTGGGTTGATGGTAATTCCAATTTATCTATTCAGGTCGTTTTCAACCGAGTGGATTTGGAACAGAACTATACTACTAGTGACTATTTCACTCTTCCAATTCATAGCAATTCAAGGTTGATATTGGATGTGTCTGGGGATCTTAAATACCAAGGTTGGTCAAAAGAATCTAAGCTTTGGTCCTCTCTTCAGTCATCCAAGTGCAGAACAAACAATTCTTGTGGAAAATTTTCCATTTGTAATCCGCAAGATCGTGACCCTTGTCAGTGCCTTGATGGCTTTAAACCGTTTGATGCTGATTCTTGGAAGCAAGGGAACAGGTCAGCTGGATGTGTCAGATTAAAGGAGTTGTCCTGCAGCAACAATAACAGCAGTAAAGATGGATTTTCAAGGTTCAGTTCAGTGGAATTACCTCCAAATGATGCAAGCCTATTGCTGGATTCTGTAGCACAATGTATCAACACTTGCTTCACCAATTGTTCTTGTGTTGCTTTTGCTTATGATTTTAATGGTAACTGCATGTTGTGGAATGATCAAGTACCAACTCTCAAGAACATCTCAAGTGATAGTCAAGATGGTGATAAAAATAAGCTAAATTTTTATCTCAGACTTGGTGCTTCAGACGTGCTTACCACCATTGGAGGACATGCAAATAGGAAGAGGAATCTACTTCTAATTGATACTTTGATCTCATTTTTAATATTGCTTATGCTGCTTGGCTTATTTGTTTACTGGACTAGAAAGCAAAGGAGGAAAGGGGATGATTTGCTAAATTTTGAAGTAGGCATGACCATGGAAGTTAAAGACGCAGAGTCAGACTTTACTAGAGCAGACAAGGGTGCAAAGATTAAGAGGAAAGAAGTCAAGTTGCCATTATTTAGTTTCGTGAGCGTTTCAGCAGCAACTAATAACTTTTCAGATGCAAATAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTATAAGGGTACATTATTGAATGGGGGTGAGGTCGCTGTAAAAAGGTTATCTCAGAGATCAGGTCAAGGATGGGAGGAGTTGCGAAATGAAGCATTGTTGATTGCAAAACTCCAACATAATAATCTTGTTAGACTACTCGGCTGCTGCATTGAGCGAGATGAAAAAATGCTTATTTATGAATTCGTGCCCAATAAAAGCTTGGATTGTTTTCTCTTTGATGCAGAAAAAAGAGGGATGCTGGATTGGGGAGCACGGGTTAGAATAATTGAAGGGATTGCCCAAAGGATCCTTTATCTGCATCGACATTCTAGGTTTCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACAACAACATGAATCCTAAAATATCAGATTTTGGAATGGCGAGAATATTTGGTGAGAATGTTCTTCAAGCAAATACAAACCGGATAGTTGGAACTTACGGCTACATGTCTCCTGAATATGCTATGGAAGGCATTTTCTCAATTAAATCTGACGTGTTTAGCTTTGGAGTCCTTTTGTTAGAGATTATAAGTGGAAAGAAAAATACTGGTTTTTATCAAACAAATTCCTTCGATCTTCTTGGATATGCCTGGGATCTATGGACCAACGATTCCGGAATAGATCTGATTGGACTTCTTTGTGTTCAGCGAAGTCCAGAAGATAGGCCAACCATGTCTGATGTTGTAACAATGATTGGCAATGACACTACATCCCTTCCTAGTCCAAAGCCACCAGCATTTCAAAATATGAGAGGTATTGAAAGTTCAAGACTCTCTAGAACCACAGAAGAAAACTTTTCTGTGAATGTTGTCACAAATTCAGTAGTTGAAGCAAGATGA 2442 0.3894 MALGSTFVSLPIFLFIYLNLFYVNATSYKELLLMGQSVRSSDTFLSNGGNYELGFFTRKRENSTKYYVGIWSKKVPHDKIVWVANRDYSLQTSSAFLTIQPDDGNIVIIDGAVTYHVSRVAKKNVSTYVTLLETGNLVLVSNSNQEILWQSFNYPTDTLLPGMNIGHDIDTGYTWSLRSWTSVDDPSPGPYTLQYNSGFASLTVNKGSNVLWVDGNSNLSIQVVFNRVDLEQNYTTSDYFTLPIHSNSRLILDVSGDLKYQGWSKESKLWSSLQSSKCRTNNSCGKFSICNPQDRDPCQCLDGFKPFDADSWKQGNRSAGCVRLKELSCSNNNSSKDGFSRFSSVELPPNDASLLLDSVAQCINTCFTNCSCVAFAYDFNGNCMLWNDQVPTLKNISSDSQDGDKNKLNFYLRLGASDVLTTIGGHANRKRNLLLIDTLISFLILLMLLGLFVYWTRKQRRKGDDLLNFEVGMTMEVKDAESDFTRADKGAKIKRKEVKLPLFSFVSVSAATNNFSDANKLGEGGFGPVYKGTLLNGGEVAVKRLSQRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFVPNKSLDCFLFDAEKRGMLDWGARVRIIEGIAQRILYLHRHSRFRIIHRDLKASNILLDNNMNPKISDFGMARIFGENVLQANTNRIVGTYGYMSPEYAMEGIFSIKSDVFSFGVLLLEIISGKKNTGFYQTNSFDLLGYAWDLWTNDSGIDLIGLLCVQRSPEDRPTMSDVVTMIGNDTTSLPSPKPPAFQNMRGIESSRLSRTTEENFSVNVVTNSVVEAR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02381 813 PIRSF SRK 2 813 IPR024171 GO:0004674
Trre15g02381 813 Pfam D-mannose binding lectin 80 180 IPR001480 -
Trre15g02381 813 Gene3D Transferase(Phosphotransferase) domain 1 591 773 - -
Trre15g02381 813 FunFam Uncharacterized protein 491 590 - -
Trre15g02381 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 152 - -
Trre15g02381 813 ProSiteProfiles Protein kinase domain profile. 515 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02381 813 ProSiteProfiles PAN/Apple domain profile. 329 415 IPR003609 -
Trre15g02381 813 Pfam S-locus glycoprotein domain 234 306 IPR000858 GO:0048544
Trre15g02381 813 SMART serkin_6 515 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02381 813 Gene3D - 23 153 IPR036426 -
Trre15g02381 813 Pfam Protein tyrosine and serine/threonine kinase 519 764 IPR001245 GO:0004672|GO:0006468
Trre15g02381 813 CDD STKc_IRAK 521 766 - -
Trre15g02381 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 756 - -
Trre15g02381 813 CDD B_lectin 36 155 IPR001480 -
Trre15g02381 813 Gene3D Phosphorylase Kinase; domain 1 489 590 - -
Trre15g02381 813 SUPERFAMILY Protein kinase-like (PK-like) 501 798 IPR011009 -
Trre15g02381 813 Pfam PAN-like domain 329 389 IPR003609 -
Trre15g02381 813 Pfam Domain of unknown function (DUF3403) 768 813 IPR021820 GO:0004674
Trre15g02381 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Trre15g02381 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 774 - -
Trre15g02381 813 SMART blect_4 35 155 IPR001480 -
Trre15g02381 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 186 IPR036426 -
Trre15g02381 813 CDD PAN_AP_plant 327 414 - -
Trre15g02381 813 SMART ntp_6 334 407 IPR003609 -
Trre15g02381 813 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02381 Trre-Chr15 19643294 19648775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02381 434 781 Receptor kinase-like Gene Family AT4G23190 52.815 1.41e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02381 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02381 - - psat:127086248 1196.42