Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02377 ATGATTTACCTAGACTCTCCTGTTGGGGTTGGCTTCTCATTTTTAGTGAATCAATCCTTTTATTATCTTGCGAATGATGAAATGACAGCGAGGGATAATTTGTTGTTTCTGCAGGGATGGTTCAAAAAATTCCCCAAGTACAAAAACAATGATTTCTTTATAACTGGAGAAAGCTATGCAGGTCATTTTGCACCTCAACTTGCACAGCTAATACTTCAAACCAAATCCACCAAGATTAACTTGAAGGGGATTGCCATAGGAAATCCTCTTCTAGAATTCAACAAAGATTTCAACTCTGACGCTGATTTTTGGTGGTCTCATGGGCAAATTAAAGATTCAACATTTCAAATGTTAAAAACAGTATGCAACTATTCCACCATTCGTAGACAAGGTCGATCTGGTAAGCTTAGTACCGATTGTTCAGAAGTGAATCGACAATTATCAATTGAGGTTGGTGGATATACCAATACTTTTGATGTTATTGCTGATATTTGTCCACCACCAGAAGAGCACCAAGCATATGTGTTGACTAAAATGCAAGGTGCTGCAGAGAAGATAGATGTATGCGTGGAAGATGAAACCATCGCATACTTGAACAGGAAAGAAGTGTACAATGCTCTAAATGCCAAGCTTGTAGGGATAACCCACTGGTCAACCTGCAGTTCAGTTCTAGTATATAATTTTCAGAATCTTGAGATTCCAACAATCTCTATGCTAGGGGAACTAGTGAAATCAGGTGTTAGAGTTTTAACATACAGTGGAGATCAAGATTCTGTCATCCCATTTATTGGGACACGGACTTTAATAAGTGAATTGGCCAAGGATCTAGGATTGAACATAACTCAGCCGTATAGAGCCTGGTTTAGGGGTAAACAGGTTGCAGGATGGACAGAGGAATATGGGGGTATACTGACCTTTGCAACAATAGTAGGAGCCGGACATGCCGCACCCTTTTATCAACCAGAGAGGTCCCTGCAGCTTTTCAAGGCATTTTTGGAAGGAAACCCACTTCCAAATAGACATTGA 1026 0.3996 MIYLDSPVGVGFSFLVNQSFYYLANDEMTARDNLLFLQGWFKKFPKYKNNDFFITGESYAGHFAPQLAQLILQTKSTKINLKGIAIGNPLLEFNKDFNSDADFWWSHGQIKDSTFQMLKTVCNYSTIRRQGRSGKLSTDCSEVNRQLSIEVGGYTNTFDVIADICPPPEEHQAYVLTKMQGAAEKIDVCVEDETIAYLNRKEVYNALNAKLVGITHWSTCSSVLVYNFQNLEIPTISMLGELVKSGVRVLTYSGDQDSVIPFIGTRTLISELAKDLGLNITQPYRAWFRGKQVAGWTEEYGGILTFATIVGAGHAAPFYQPERSLQLFKAFLEGNPLPNRH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02377 341 SUPERFAMILY alpha/beta-Hydrolases 1 337 IPR029058 -
Trre15g02377 341 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 321 IPR001563 GO:0004185|GO:0006508
Trre15g02377 341 ProSitePatterns Serine carboxypeptidases, serine active site. 54 61 IPR018202 GO:0004185
Trre15g02377 341 ProSitePatterns Serine carboxypeptidases, histidine active site. 304 321 IPR033124 GO:0004185
Trre15g02377 341 Gene3D alpha/beta hydrolase 1 339 IPR029058 -
Trre15g02377 341 PRINTS Carboxypeptidase C serine protease (S10) family signature 304 317 IPR001563 GO:0004185|GO:0006508
Trre15g02377 341 PRINTS Carboxypeptidase C serine protease (S10) family signature 4 14 IPR001563 GO:0004185|GO:0006508
Trre15g02377 341 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 65 IPR001563 GO:0004185|GO:0006508
Trre15g02377 341 Pfam Serine carboxypeptidase 1 334 IPR001563 GO:0004185|GO:0006508
Trre15g02377 341 FunFam Carboxypeptidase 235 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02377 Trre-Chr15 19608736 19610804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02377 197 337 Calmodulin-binding Proteins AT2G22960 32.624 5.40e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02377 K16297 - gmx:100805028 471.855