Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02373 ATGAAGTTTGACTCTGAGGCCGCAGCTTATGAATTCTATAACGAGTACAGTAAAAGAATTGGATTTGGTATTCGTAGAGAATATGCAAACAAAAGCAAAAAAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGAGAAATATAAGGTTGTTGACTTTGTAGCTCAGCATAACCACCCTCTTCAACCACAAGAGTATGTTCACATGATTCGCTCTCATCGGCGCATATCTGAGGCACAAGCATCACAAATTGTGTTGGGGGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCAAAGCAAGCTGGTGGATTAGAGACAGTTGGTTTTACAAAACAAGACCTTTAG 366 0.3825 MKFDSEAAAYEFYNEYSKRIGFGIRREYANKSKKDGVLTSRRFTCFKEEKYKVVDFVAQHNHPLQPQEYVHMIRSHRRISEAQASQIVLGDESGLRPKDLHEYISKQAGGLETVGFTKQDL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02373 121 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 49 - -
Trre15g02373 121 Pfam FAR1 DNA-binding domain 11 48 IPR004330 -
Trre15g02373 121 Coils Coil 121 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02373 Trre-Chr15 19572753 19573226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre15g02373 FAR1 3.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02373 - - cam:101496652 212.616