Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02335 ATGGCTATATGTACTACTACTCGTCATTTGTTCACTTTCTTCCTTGTTTTCTTCTACCTCACCCTTCGCCTTATTTCTGCCGATGTTCGTATTGCTGCAGCAGTTTGTGCAAGGCCTAGTGGCACATGGTCTGGAATTTGTGTCGGGTCTAGCATATGTAATGACCAGTGTAAAGAGAGAGAGAATGCTGTCGGAGGAGGCTGCAACGTTTTGGCTTGTTATTGTCATTTTTTTTGTGATGATGGTGGAGGAAATAGATAA 261 0.4291 MAICTTTRHLFTFFLVFFYLTLRLISADVRIAAAVCARPSGTWSGICVGSSICNDQCKERENAVGGGCNVLACYCHFFCDDGGGNR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02335 86 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Trre15g02335 86 SMART gth_4 35 79 IPR003614 GO:0006952
Trre15g02335 86 Pfam Gamma-thionin family 35 79 - -
Trre15g02335 86 SUPERFAMILY Scorpion toxin-like 35 79 IPR036574 -
Trre15g02335 86 Gene3D - 31 79 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02335 10 79 Plant Defensins Gene Families AT2G26010 35.135 1.16e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02335 - K17342 ncol:116255924 59.6918