Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02325 ATGGAAACTAAGGAAACTGTTGTGCATCTAGGAAGACCGTGTCTAAGACCAGATCAATGGGATGTGCTAACTCCACTGTACAAAAATTTTGATCTGATATGTTCTGAAGGTCCAAGGTTCGGTGATATGTTCAAGTGCAAGTTGAGATCTACCAAGGAGGTTGTAGCTATTAAGATTTTAACCATTCCAGAAGACCTCAAAAGCAATGGAATTCCATACAGTATCTTGAATCACGTCTCTATCCTCAAAGCGTTAACGCATGAAAATATAGCCAAATTGGAAACAGTGATAAGAACCGATGAGGATGTGGAAGACGTATATCTCGTTTTCAAGCATGTTGACACTAGTCTTAAAAAATTCCTTGCCACTCCGTTCCCTTTTGAGATTCAAAAACTTGGAAAACCTTTGCTACGTCAAGCTCTTTCTGGATTGGCATACATTCATATTCAGAAAATTATACACAGAGATCTGAGACCTCATAATATTCTGGTTTCATTTAAAAATCAGGAGATCAATGAAGTGAAGCTAACTGACTTTGGTGTGGCAAAATCTATTGCACCTCCTCTTTCACCCTACTCTATTCATATGGGTAATCCTTGTTACAAAGCACCTGAACTTTTGCTAGGTTTTACAAATTACTCAACTGCAGTTGATATCTGGTCTATGGGCTGCATATTTGCTGAGATGCTTAAGCGCCAACCTCTGTTCATTGGTAATGATGAACCGAAGATATTGACTGAGATATTTTGGCTGCTTGGCACTCCAACAGAAGAAACCTGGCCTGGTGTGACTTCTATATGCAGTTTCATTAAAGCATTTGACCCTCCAATAAAGCCGAAGAACCTTGCAGCTGAATTTCCTATGCTTGAACCAGATGGCCTTGATCTTCTTTCAAAAATGCTTTGCCTATGCCCGAATAGCAGGATTTCAGCTGATGAAGCACTTGACCACCCATATCTTCGACCTTCCGCCCCCTGA 978 0.4039 METKETVVHLGRPCLRPDQWDVLTPLYKNFDLICSEGPRFGDMFKCKLRSTKEVVAIKILTIPEDLKSNGIPYSILNHVSILKALTHENIAKLETVIRTDEDVEDVYLVFKHVDTSLKKFLATPFPFEIQKLGKPLLRQALSGLAYIHIQKIIHRDLRPHNILVSFKNQEINEVKLTDFGVAKSIAPPLSPYSIHMGNPCYKAPELLLGFTNYSTAVDIWSMGCIFAEMLKRQPLFIGNDEPKILTEIFWLLGTPTEETWPGVTSICSFIKAFDPPIKPKNLAAEFPMLEPDGLDLLSKMLCLCPNSRISADEALDHPYLRPSAP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02325 325 ProSitePatterns Tyrosine protein kinases specific active-site signature. 152 164 IPR008266 GO:0004672|GO:0006468
Trre15g02325 325 Gene3D Transferase(Phosphotransferase) domain 1 130 324 - -
Trre15g02325 325 SUPERFAMILY Protein kinase-like (PK-like) 40 322 IPR011009 -
Trre15g02325 325 FunFam Mitogen-activated protein kinase 129 323 - -
Trre15g02325 325 Gene3D Phosphorylase Kinase; domain 1 23 124 - -
Trre15g02325 325 ProSiteProfiles Protein kinase domain profile. 29 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02325 325 SMART tyrkin_6 28 320 IPR020635 GO:0004713|GO:0006468
Trre15g02325 325 Pfam Protein kinase domain 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02325 325 PANTHER CELL DIVISION PROTEIN KINASE 39 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02325 Trre-Chr15 19259660 19262290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02325 40 321 Core Cell Cycle Gene Families AT3G48750 40.989 2.97e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Trre15g02325 Pkinase 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02325 K02206 - psat:127128144 315.464