Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02322 ATGAGCTACTGCACCAGTAACACTCTTCGCCTTCAATCTTGCACAATCACAAACTGCAATCTTCACCAACATGGCAGGCATATTGTTCCCACCAATGCGCTCAAAAAACCTACTGAACATGAAATTTCTCTTCAGTCAAAGTTGAAGATTAATAGCAACAGTATTATGACATTCATTGGTGGAATCACAGCGGCACAATTGGTTGCTCCGGCCACTGCAAAAGCTGAAATGGCTGCTTCTTTTTTTACTTTGGCTGATGGTGGTCTCGGTGACTGGTTTGGAGGCATTCTATTTTCAGCAGGACAACAGGCCAATGAAGCAGTTCTGGATCAACTATCGTCCCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGACTTGTAACCAGCCTTTCTCCCTGTACACTTAGTGTGTTACCACTGACTCTCGGTTATATTGGGGCATTTGGCTCTGGTAAAAGCAAAGCGCAGGTCATTGGAGATTCCATTGCATTTTCCTTGGGTCTTGCAACCACATTAGCACTACTGGGTGTGGGAGCATCATTTGCAGGAAAGGCTTATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATAATTGAATTAACGCTCCCCTCATTCTTCGAAAGTTTTGATCCACGTTCAGTGGCTGCCAATTTTCCATCAAGTGTGCAAGCATACCTTGCTGGGCTTACATTTGCATTAGCTGCCTCACCCTGCAGTACACCTGTTCTTGCTACTCTTCTTGGATATGTCGCTGCATCTAAGAATCCAGTGATTGGAGGCAGCTTGCTTTTGACATACACAACAGGTTACATTTCTCCATTACTTTTGGCTGCATCTTTTGCTGGAGCGTTACAGAGCTTGCTTTCATTTCGCAAGTACTCAGCATGGATCAATCCTATAAGCGGAGCAATGTTGTTAGGAGGCGGTGTATATACCTTCTTAGATAGGCTTTTCCCAGCCACCACAATGGCAATGTAG 1026 0.4474 MSYCTSNTLRLQSCTITNCNLHQHGRHIVPTNALKKPTEHEISLQSKLKINSNSIMTFIGGITAAQLVAPATAKAEMAASFFTLADGGLGDWFGGILFSAGQQANEAVLDQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAQVIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELTLPSFFESFDPRSVAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPATTMAM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02322 341 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 114 341 - -
Trre15g02322 341 Pfam Cytochrome C biogenesis protein transmembrane region 124 330 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02322 Trre-Chr15 19224867 19229029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02322 17 341 Chloroplast and Mitochondria Gene Families AT5G54290 70.206 4.41e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02322 - - mtr:25502555 560.066