Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02309 ATGGCGGATGCTGCTATCTCGATTGTGGCTAGTTTGGTTGAACGTTTGGTAGGACCGGCAATACGTGAAGGAAGATGTTTTCTTTGCGTTAATAAATTTATCAGGGATCTTGAGAATGAAAATAAAGGGCTGGTAATCGAAAGAGATAACTTGTTGGATCGTGTTGAACAAGCCAAGCATAGAACTGAAGAAATTGAGAAACCGGTGGAAATGTGGCTAAATGATGTGAAAAATCTATTGGAACAGGTTGAAGATTTAGAACAAATGATGAGAGCAAATACTAGTTGCTTTCAAGGACAGTGTCCAACTTGGAAAAGATACCGTTTATGCAAGCAAATAGTAAAGAAGATAGAGGCAATAGGAAAATTCAAAGGTAAAAGCAATATTCAGCCGTTTTCTCACCGTGCTCCTCTTCCCGGCATACAGTTGCCATCATCGGAGAACTTTACTTATTTTGAATCAACAAAAGTTGCTTATAGTGAACTATTGGAGGCACTTCAAGATGATGACATTTACATGATTGGAGTGTATGGAATGGGCGGAACAGGGAAGACAACTCTTGTAACAGAAGTGGCTAAGGAGGTTGAAGCATCAATGATTTTTGACAAGGCTATATTAATTACGGTCTCTCAAACTCCAAATATTAGAGATATTCAAGGAAGAGTAGCTGATTTTTTGAACTTGAAATTGGAGGAAGAAAGTGAGGAGGGAAGAGCACAGCGTCTCTGGTTGAATTTGAAAGAAAAAAAGAGGATGCTCGTAATAGTAGACGACTTATGGAGAGAGTTTAATTTGAGCGATATAGGGATTCACTTGGACAACGATAACAAGGGCGCATGGAAGATCCTTGTAACCACTCGCAATCAACATGTATGTGATTTGATGGATTGTCAAAAGAAGATTCATCTAGAACTCTTATCTGAAGATGAGTCTTGGACTTTGTTCAAAAGCCATGCACATATTGATGAAGAATTCTCCAAGTCATTGGATGGTGTGCCACAAAAAATTTGCCGCGAATGTAAAAGACTACCTATAGCAATCAAAGCGGTGGGATCTTCTTTGAAAGGAAAGTCTGATGCTGAATGGAAGGTGGCATTTCACAGGTTGACACATTCAGAGACCATTGACGATCATATGGACGGAGTGGGAGATGCTTTAAGTTGTCTGAAATTAAGCTATGATTATTTATCTTACAAAGAAAAGCTTATCTTCTTAATGTGTTCTATGTTTCCAGAAGATTATAAAATCTCAATAGAAGATTTGATCCGATATGCAGTGGGACTTGGACTAGGAGGAGAATTTCCACTAGACTCAGCAAGAGATGAGATCGAAGCAACAATTAACAGACTTTTGCAATCATGTTTGTTGATGCATACTGGGGAAAGCAAAGAGTTCGTGAAGATGCACGACACAGTTCGCGACACAGCCTTATGGATTGCAAAGAGATCAGAGAATCACAAAATCGTGGTAAATGTTGACAAACAAGTTAGCAAATTGGTAATGGATGACAATATAAGAGATTGTTTTGCACTATCCTCGTGGTATGACAAGCAAGATCAAAAATTTCATCAATTAGATGCTCCAAACCTTGAAATTCTATTGGTACATTCTAGGAAGAGGAAATCCTTTGATTTATCCCGTGCAACCTTTCAAGGAGTGAAAGGGCTGAAGGTTTTTTCTCTAAACTATAATGGATATGGTGATCCATCATTATCATTGCCATCTTCAACCGATTCATTGACAAATCTTCGAACTCTGCGCTTGAATGGATGGAAATTAGATAACATTCTTTTCATAACAAACTTAACAAGACTTGAGATTCTTGACTTGCAACATTGTATCCTCAATGAAATTCCTAAGGAAATAGGAAAACTCAATAGATTGAAGCTTCTGGATTTATCATATTGTCGTTTTCTTCAAGAAAACTATAATGCCGCAATAGGGAAATTGTCAAAATTGGAAGAGTTATATGCTTTCAAGTGCATGCCAAAAGAGTACATTTATCAGTGTGCTATGGACATTATTACTCTTCCAAGGTTGCAAAGGTTTGTAATACATACTGATCTTAGTAGAGATTTTGCAAAAACCTCGAGACATTTAGAAGTAAAGGATTTTAATATCTCCAATATGAAGGCTTCTACAAAGAATCTTCTTCAAATAGCTGAAACAGTTCATTTGATAAATCTTCATGGAGGATGTAAGAGTATCATGCCAGACATGATTGGAGTTATGGGAGGTGTGAGTTGTTTTAAGTCTCTCTGTCTTGAGGGTTGCTCAGAGATAGAATACATCTTCAATACAGCCTCTGATTCCGAGCAAGATGCTCCTGAGTTGGTGGAATTAGTACTGCTAAGATTGGAAAACTTGGAAGAATTGTGTCGTGGTACACCTCTACACGTGCTAAGGTTCTTTGAGAGATTAGAAAAACTTGAAATACAACAATGTTTGAAGTTACACAATATATTTCCATGGGACTGTAACTTACGAAATCTTAAAGTCCTCAAAATAGCAAACAACGTGTTTGGTGAAGCTCTCTTCTCGATATCTGTTGCCTACAGTCTTCAACAACTAGAAGTACTAGAAGTAGAGCAATGTGATGAACTGAAGCTTATAATTGCCACCGGAAGTGAGCTTGGTTCTAATTCAGACAATGAAATATATCAGACTCCTCTAACGAGTTCTCATTTCGTGATGTCTAGATTGAAGAAACTTCACATTTCTAAGTGTAAGAAGTTAGAGTCATTATTACCTATCTGTTGTGTTGAAGGACTTGCACCACTGGAAGAGATACAAATAAAGAAGGCTCCTCAGTTGAAACTTGTATTTGGTGAATGTGATCACCAAAATCATTCATCTCAACAATATCCAAATCAGAACTTGCGTCCTTATTTGAAACGTCTCAAACTCACAGATCTTGATAATCTGATTGGAATATGTCCTGAAAAAAATTGTGAAAAATGGCCTTCTTCGACAGTACTAATTGTGGAGAAATGCCCTAAGTTGAGTGCATCATGGATCGCTACATTGGCCGGCTCTGAGGTTAGAGAAAAAGTTGTCAAGATAGAAAAAATAACCTTAAGAGGTTTTTCTGGATTGAGCCTCATATCAAGGGTAGGTCCTTCTCCAAGACATATTTTAAGTCTTCATTGTCTACAACGATTAGCAGTGAGCAATTGTAATAACTTGAGATCTCTATTCTCGATGGAGTTACATAGAAGCCTACCAGAGTTGACAACGTTTCGAGTATACTCCTGCCATGAATTAGAACAAATCGTTGAAGAAAATGAAAAGTTTGTGTTCAATACTGAAGTGTGTTTTCCAAAGCTAAAAGATATAAAGATTGTAAATTGCAAAAAAATGACAAGTCTTTTCTCTGTTGCTATGATTAGAATGCTTCCAAAGTTAAGCACTCTTGAAATTTCAGAGGTTACTCAACTAGAAGAAGTTTTTAAGGGAGGCAACACTATCATCAATGATGTTGAAACTGGACTTGTAAACTTATCAAAAATAGAACTTCATAAGTTGCCAAGTTTTGTTGATATTTGCAAGGGTTTTAAGTTACAGACTCCGAAAATTAAACATCTCGACATAGTTGAATGCCCGAACATATCTCCCAGTCTGAGAGAAATTCAGGCAAATAATCCTCTACAAACAAGGTTTACTGTCACAAATTCTCTATAG 3681 0.3711 MADAAISIVASLVERLVGPAIREGRCFLCVNKFIRDLENENKGLVIERDNLLDRVEQAKHRTEEIEKPVEMWLNDVKNLLEQVEDLEQMMRANTSCFQGQCPTWKRYRLCKQIVKKIEAIGKFKGKSNIQPFSHRAPLPGIQLPSSENFTYFESTKVAYSELLEALQDDDIYMIGVYGMGGTGKTTLVTEVAKEVEASMIFDKAILITVSQTPNIRDIQGRVADFLNLKLEEESEEGRAQRLWLNLKEKKRMLVIVDDLWREFNLSDIGIHLDNDNKGAWKILVTTRNQHVCDLMDCQKKIHLELLSEDESWTLFKSHAHIDEEFSKSLDGVPQKICRECKRLPIAIKAVGSSLKGKSDAEWKVAFHRLTHSETIDDHMDGVGDALSCLKLSYDYLSYKEKLIFLMCSMFPEDYKISIEDLIRYAVGLGLGGEFPLDSARDEIEATINRLLQSCLLMHTGESKEFVKMHDTVRDTALWIAKRSENHKIVVNVDKQVSKLVMDDNIRDCFALSSWYDKQDQKFHQLDAPNLEILLVHSRKRKSFDLSRATFQGVKGLKVFSLNYNGYGDPSLSLPSSTDSLTNLRTLRLNGWKLDNILFITNLTRLEILDLQHCILNEIPKEIGKLNRLKLLDLSYCRFLQENYNAAIGKLSKLEELYAFKCMPKEYIYQCAMDIITLPRLQRFVIHTDLSRDFAKTSRHLEVKDFNISNMKASTKNLLQIAETVHLINLHGGCKSIMPDMIGVMGGVSCFKSLCLEGCSEIEYIFNTASDSEQDAPELVELVLLRLENLEELCRGTPLHVLRFFERLEKLEIQQCLKLHNIFPWDCNLRNLKVLKIANNVFGEALFSISVAYSLQQLEVLEVEQCDELKLIIATGSELGSNSDNEIYQTPLTSSHFVMSRLKKLHISKCKKLESLLPICCVEGLAPLEEIQIKKAPQLKLVFGECDHQNHSSQQYPNQNLRPYLKRLKLTDLDNLIGICPEKNCEKWPSSTVLIVEKCPKLSASWIATLAGSEVREKVVKIEKITLRGFSGLSLISRVGPSPRHILSLHCLQRLAVSNCNNLRSLFSMELHRSLPELTTFRVYSCHELEQIVEENEKFVFNTEVCFPKLKDIKIVNCKKMTSLFSVAMIRMLPKLSTLEISEVTQLEEVFKGGNTIINDVETGLVNLSKIELHKLPSFVDICKGFKLQTPKIKHLDIVECPNISPSLREIQANNPLQTRFTVTNSL 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02309 1226 Coils Coil 636 656 - -
Trre15g02309 1226 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1039 1203 - -
Trre15g02309 1226 FunFam Probable disease resistance protein At1g61300 149 300 - -
Trre15g02309 1226 Gene3D - 392 477 IPR036388 -
Trre15g02309 1226 Gene3D - 136 302 IPR027417 -
Trre15g02309 1226 SUPERFAMILY L domain-like 467 1124 - -
Trre15g02309 1226 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Trre15g02309 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 407 IPR027417 -
Trre15g02309 1226 Gene3D Ribonuclease Inhibitor 512 933 IPR032675 -
Trre15g02309 1226 Coils Coil 34 61 - -
Trre15g02309 1226 Gene3D Ribonuclease Inhibitor 1020 1221 IPR032675 -
Trre15g02309 1226 Coils Coil 69 93 - -
Trre15g02309 1226 PRINTS Disease resistance protein signature 173 188 - -
Trre15g02309 1226 PRINTS Disease resistance protein signature 340 354 - -
Trre15g02309 1226 PRINTS Disease resistance protein signature 246 260 - -
Trre15g02309 1226 PRINTS Disease resistance protein signature 623 639 - -
Trre15g02309 1226 Gene3D - 305 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02309 Trre-Chr15 19059396 19063196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02309 159 636 WRKY Transcription Factor Family AT5G45050 23.889 2.03e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02309 - - cam:101506740 1253.43