Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02305 ATGGCGACGGGTTCTACAATTGTTTCCTCGCTAATATTATTGTTATTTCATTGCTTCAATTTGCTTTGCATAAATGCAACATCCTACAGAGAATTGCTACCAATGGGACAGAAAATAAGATATTCAGACACACTTGTTTCAAAAGGTGGGAACTACGAACTGAGATTTTTCACTACATACAGAGAGAACTCGACCAAGTACTACGTAGGTATACGGTTTAAAAAGGTACCAAATGACAAAGTTGTATGGGTTGCCAACAGAGATTGCACATTTGAAACATCCTCAGCGTATCTCACCATTTACCCTGATGGTAACATTGTGATCATAGATGGTAGGACGATTTACGGCGTGACAGGTGTTCCAAACAACAAAAATAGTATTAGTACCTACATGATCCTCTTGGACACAGGAAACTTGGTACTGTTGAACACCTCAAACCAAGCAATAGTATGGCAGAGTTTTGATTACCCCACGGATACCCTTTTGCCTGGAATGGAGATAGGACAAACTTGGTCATTGAGATCATGGAAGAGTAAAGATGACCCTTCTCCAGGACCATATACTCTCCAATATGATTCTGGCATACCGATTCTATCGGTGAATAAGGGTTCTAATGATTTGTGGATTGATGGCAATTCCAATTTTTCTGTTTTTGATGTTTTTAGTGGAGCTGATCTGCAATATAGCTCCGATTCCAAAATCTATATTCCAACTGATAGCAATTCTCGATTGGTATTGGCAGTGTCTGGGGATCTTAAATTAGAAGCCTGGTCCAAGAAATCTAACCGTTGGCTTTTTCTACTATCATCCAAGTGTTCCATAGACAACCCGTGTGGAGTTTTTTCAATTTGTAATCCGGATGAAGCTATTGACCCGTGTAAGTGTCTCGATGGTTTTAAACCGTTAGATGCTGATTCTTGGAAGCAAGGTAACAGGTCAGCTGGATGTGTCAGGAGAAAGACCTTGTCCTGCAGCAACACTAACAGTAATGATACATTCTTGAATATTTCAGTGGAATCACCTCCGCCATATTATACGTACCGGGAGGTGGATGTACTAGCAGAATGTTTATCTAGTTGCTTCAATGACTGTTCTTGTGTTGCTTATGCATATTATTTAAACGGTACCTGCATGTTGTGGAATCAGCAAGTACCGACTCTGAAGAAAACCTCATTTGATATTCAAGATGGTAATAATAATAAACTAAACATTTCATTCAGACTTGCTCACCCAGAGAGACTTATCACAAATTCTAATACAATTGGAAGACATGGAAACAGGAAGAGGAATCTACTTCTAATTATTATTTCGATCTCAATTTTACTCTTTCTTTTACTGTCTGGCATATTTGTTTACAGGACTAGAAAGCAAAAAAGTAAAGGGGATGATTTGCTAAATTTTGAAGTAGGCATGAGCATGAAAGTTAATAAAGACTCTGACATAGCAGACAAGGGTACAAAAATTAAGAGGAAAGAAGTCAAGTTGCCATTATTCAGTTTCCTAAGCGTTTCAACGGCAACTAATAACTTTTCAGATACAAATAAACTCGGTGAAGGTGGTTTTGGACCTGTTTATAAGGGTATATTATTGAATGGGGGCGAGGTTGCTGTAAAAAGATTATCCCGAAGATCGGGTCAAGGATGGGAGGAGTTAAGAAATGAAGCATTGTTGATTGCCAAACTCCAACATAATAATCTTGTTAGACTTCTCGGCTGTTGCATTGAGCGAGATGAAAAAATGCTTATTTATGAATTCATGCCAAATAAAAGCTTGGATTGTTTTCTCTTCGATGCAGTGAAAAGAAGGATGCTAGATTGGGGAACACGTGTTCGAATAATTGAAGGGATTGCCCAAGGATTACTTTATCTTCATCAATACTCCAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGATACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCTAGGATATTCGGTGACAATGAACTTCAAGCAAATACAAATCGGATAGTTGGAACTTATGGCTACATGTCTCCGGAATATGCTCTGGAAGGCCTTTTCTCAATTAAGTCTGACGTTTTTAGCTTTGGGGTTCTTCTGTTAGAGATTATAAGTGGCAAAAAGAATACTGGTTTTTATCAAACAAACTCTTTCAATCTTCTTGGATATGCTTGGGATCTATGGACAAATGATTCCGGAATGGAGCTGATTGATTCAGAATTGGATGATATCTCCAGCAAGCATTTAGTACAAAGATATGTGAATATAGGACTTCTATGTGTTCAACAAAGTCCACAAGATAGGCCAACTATGTCTGATGTTGTATCAATGATTGGTAATGACACTACATCCCTTCCTAGTCCAAAACCACCAGCATTTCAAAATGTGAGGGGTATTGTTGAAAATAGAAGACTCCCTAAAAGCATAGAAGAAAACTTTTCTGTGAATATTATCACAGATTCAATAGTTGAAGCAAGATGA 2487 0.3796 MATGSTIVSSLILLLFHCFNLLCINATSYRELLPMGQKIRYSDTLVSKGGNYELRFFTTYRENSTKYYVGIRFKKVPNDKVVWVANRDCTFETSSAYLTIYPDGNIVIIDGRTIYGVTGVPNNKNSISTYMILLDTGNLVLLNTSNQAIVWQSFDYPTDTLLPGMEIGQTWSLRSWKSKDDPSPGPYTLQYDSGIPILSVNKGSNDLWIDGNSNFSVFDVFSGADLQYSSDSKIYIPTDSNSRLVLAVSGDLKLEAWSKKSNRWLFLLSSKCSIDNPCGVFSICNPDEAIDPCKCLDGFKPLDADSWKQGNRSAGCVRRKTLSCSNTNSNDTFLNISVESPPPYYTYREVDVLAECLSSCFNDCSCVAYAYYLNGTCMLWNQQVPTLKKTSFDIQDGNNNKLNISFRLAHPERLITNSNTIGRHGNRKRNLLLIIISISILLFLLLSGIFVYRTRKQKSKGDDLLNFEVGMSMKVNKDSDIADKGTKIKRKEVKLPLFSFLSVSTATNNFSDTNKLGEGGFGPVYKGILLNGGEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDCFLFDAVKRRMLDWGTRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGDNELQANTNRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTNSFNLLGYAWDLWTNDSGMELIDSELDDISSKHLVQRYVNIGLLCVQQSPQDRPTMSDVVSMIGNDTTSLPSPKPPAFQNVRGIVENRRLPKSIEENFSVNIITDSIVEAR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02305 828 Pfam D-mannose binding lectin 81 170 IPR001480 -
Trre15g02305 828 Pfam Protein tyrosine and serine/threonine kinase 513 779 IPR001245 GO:0004672|GO:0006468
Trre15g02305 828 PIRSF SRK 3 828 IPR024171 GO:0004674
Trre15g02305 828 Gene3D - 25 154 IPR036426 -
Trre15g02305 828 SUPERFAMILY Protein kinase-like (PK-like) 495 796 IPR011009 -
Trre15g02305 828 FunFam Uncharacterized protein 486 585 - -
Trre15g02305 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 788 - -
Trre15g02305 828 CDD PAN_AP_plant 321 409 - -
Trre15g02305 828 Pfam Domain of unknown function (DUF3403) 782 828 IPR021820 GO:0004674
Trre15g02305 828 Pfam S-locus glycoprotein domain 238 301 IPR000858 GO:0048544
Trre15g02305 828 CDD STKc_IRAK 516 780 - -
Trre15g02305 828 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 129 796 - -
Trre15g02305 828 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02305 828 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Trre15g02305 828 Gene3D Transferase(Phosphotransferase) domain 1 586 787 - -
Trre15g02305 828 Gene3D Phosphorylase Kinase; domain 1 484 585 - -
Trre15g02305 828 SMART blect_4 36 157 IPR001480 -
Trre15g02305 828 SMART serkin_6 510 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02305 828 CDD B_lectin 44 157 IPR001480 -
Trre15g02305 828 ProSiteProfiles PAN/Apple domain profile. 324 405 IPR003609 -
Trre15g02305 828 Pfam PAN-like domain 324 383 IPR003609 -
Trre15g02305 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Trre15g02305 828 SMART ntp_6 328 398 IPR003609 -
Trre15g02305 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 182 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02305 Trre-Chr15 19025801 19028997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02305 434 795 Receptor kinase-like Gene Family AT4G23190 52.022 3.01e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02305 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02305 - - psat:127086248 1125.15