Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02303 ATGGAGATTAAAGTTTCAAATGCAGGACAACAAATTGGAGGAACCAACTTTTTCAAAACTTGTTTCAATGTACTCAATGCCTTGACAGGTATTGGGATACTATCAATGCCATATGCAATTTACCAAGGAGGGTGGTTAAGTATTATGCTGCTAATTATTTTTGGGATGATATGTTGCTACACAGCTTTACTTTTGGAAAGGTGTATGAATGTACATCCAAGTATCAAATCTTATGCCGATATAGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTATCATAGCAATTTTCATATACATTGAGTTGTTTTTAGTTGCGGTGGAGCTTCTTATATTAGAAGGAGACAATTTGGAGAAACTTTTCCCAAATATGGGACTCACAATATGTGGCCATAGAATTGATGGTAAAAGTTGTTTTGTGATTATCACTGCTTTGGCAATATTACCAACAACATGGTTGAGAAACTATGGAGCTCTAGCTTATATTTCAATTGGTGGAGTATTCACTTCAATTATTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGATTTCATGAAAGAGGACATTTGATACATTGGGGTGGATTGTCTACTTCTATGAGCATTTTTGCATTTTGTTACAATGCTCATGCATTAATGCCCACAATTCTCAATTCCATGAGTGACAGAAAACAATTTCCCAAGGTTGTTTTCGTTTGCTTTGTGGTAAGCGTTGTTATCTACGGAACTATTGCCGTTTTAGGCTACACAATGTTTGGAGATGATTTGAAGTCACAAATAACATTAAATTTACCCACAAAAACTACAAGTACTAAATTAGCAATCTATTCTACAATAATTAATCCTTTCACTAAGTATGCTATTATAATCAGCCCAATAACAATTGCTATTGAGGAAAAATGGAATTTATGCAAGAGTAGAGCTATTAGCATTCTAGTTAGAACAATCATTGTGGCTAGTAGTGTACTTGTGGCACTATACATTCCTTTTTTTGCTTACCTTATGGCGTTTATTGGTTCATTCTTGAGTGTAGCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATAAACAATGCTACTAAGAGTTTTGGATTAGAGCTTATAATCATCATGGGAATTCTTCTCGTTGGTATACTTATGGGAATATGTGGTACCTACATTTCAGTGGAGAAAATAGTAAATATAATGAAACATTGA 1215 0.3473 MEIKVSNAGQQIGGTNFFKTCFNVLNALTGIGILSMPYAIYQGGWLSIMLLIIFGMICCYTALLLERCMNVHPSIKSYADIGEVAFGYKGRAIIAIFIYIELFLVAVELLILEGDNLEKLFPNMGLTICGHRIDGKSCFVIITALAILPTTWLRNYGALAYISIGGVFTSIILIGCVVWVGEVDGVGFHERGHLIHWGGLSTSMSIFAFCYNAHALMPTILNSMSDRKQFPKVVFVCFVVSVVIYGTIAVLGYTMFGDDLKSQITLNLPTKTTSTKLAIYSTIINPFTKYAIIISPITIAIEEKWNLCKSRAISILVRTIIVASSVLVALYIPFFAYLMAFIGSFLSVAISLLFPCLCYLKINNATKSFGLELIIIMGILLVGILMGICGTYISVEKIVNIMKH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02303 404 Pfam Transmembrane amino acid transporter protein 15 393 IPR013057 -
Trre15g02303 404 PANTHER OS05G0424000 PROTEIN-RELATED 22 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02303 Trre-Chr15 19016865 19019553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02303 2 399 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.137 1.05e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02303 K15015 - gmx:100812006 554.673