Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02302 ATGTTACATATTTGGTTCTTATTATTCTTGTACATAAGAACATGCACATCATTTGATAGTTTAACATCAAACCAATCTCTCAAAGATGGCCAAACATTAGTTTCATCTGATGGAACATTTGAGCTTGGTTTCTTCAGTCCAAGAGATTCAACAAATCGATATTTGGGTCTATGGTTCAGAAACGTGTCACCTCAAAAACTGGTTTGGGTTGCAAACAGAGAATCACCACTTAACAATTCAAGAGGATTCTTAAGAATCAATTCAGAAGGTGTTCTTATTGTTCTTAATGGAACAAACAGTACCACTGTTTGGTCCTCTAATGTTACAACCAAAGAAGTGAACAACCCAATTGCTCGTTTGTTGGATTCTGGTAATCTTGTGGTACAAAATGGAAAGAATACAAAAGGAGATCATTTTTTGTGGCAGAGTTTTGATTACTTGTGTGACACGTTATTGTTAAATGGGACAAAACTTGGATGGGATTTAGTAACTGGTCATGAAATATTTTTATCATCTTGGAAAAAAAATGATGATCCATCTATAGGTGAGTATTCTCTAAGAATTTACCGTAAAGGATATCCACAACTTTTCAAATTCAAAGGGTTAGAGAGAAAATTTAGAATAGGGTCATGGAATGGTGTTAGTTTAAGTGGATATCCAACTCAGTTACTCAAACAACTACATAGGTTTAGGTTTGTTTTCGATGAAAAACAAGTTTATATCGAGAGTGAAACCCTCGATCGATCGATAATGGCAATTTACCGACTTACTCCTTTAGGCCACGGAGAACTTTCAGTTCGGACAAGTAAGACAAGAAACTGGAGAGTGATTTCAACTGGTGAGGAAGATGAGTGTGAAAACTATGCATTGTGTGGTACTTATTCTATATGCATTATGGATGGAAATTTTCCAACTTGTGAATGCATGAAAGGGTATGTTCCTAAGTTTCCAAAACAATGGAATATATCATATTGGTCTAATGGTTGTGTTCCGAAGAATAAGTCTAATTGCGAAAATAGTTACAAAGATGGGTTCTTGAGGTATAGTAAAATGAAATTGCCAGACACGTCTTCCTCGTTGTTTAGTAAGATCATGGATCTTGAGGAATGTAGGAATTCGTGTCTAGAAAATTGTTCGTGTTCGGCGTATGCAAATTTGGATATCCGTAATGGCGGAAGCGGTTGTCTACTGTGGTTCGATGAATTGGTCGATGTAAGGAAGTTTTCTAAATGGGGACAAGACCTTTATGTTAGAGTCCCGGCTTCTCAACTAGATCATCTGCTGATTAATGACAGTAGTAGTAACAAACAGAAGCTGGTAGGAATCACGGTTGGCGCAATTAGTTTTGGATTAATGGCTACATGTATATGCATAATGATATATATAAAGAGAGGAAGAATATTTTATAAGAATCATTATGAAAATATATTCAAGAGAGAAGACACAGATCCACAGACATTTGATTTTCAAATCATAGCTCAAGCTACTGGAAACTTTTCAAGAAGCAACAAATTGGGTGAAGGTGGCTTTGGACCAGTATATAAGGGTACACTAAGATGTGGACAAGTATTAGCAATAAAAAGACTTTCAAATGATTCTGGACAAGGTTTGGAGGAGTTCAAAAATGAAATTGCAGTAATTGCAAAGCTTCAACACCGTAACCTTGTCAAGCTTCTTGGTTACTGCATTCAAGGAGAAGAAGTAATGTTGATCTATGAATACATGGCAAACAAAAGCTTAGACAATTTTATTTTTGATGAAAATAAAAGGAAGATGCTAGATTGGTCGAAGAGATTCAACATTATTTGTGGCATTGCACGAGGGCTACTTTATCTTCATCAAGACTCTAGATTAAGAATTATTCATAGAGATCTAAAACCTAGCAATATCTTACTAGATGCAAATTTTGAAACAAAAATTTCGGACTTTGGTCTAGCGCGTACATTGTTGGGAGATCAAGTTGAGGAAAAGACAAAAAGAGTTGCTGGAACCTATGGGTACATGTCACCAGAGTATGCGGTGCGTGGACGTTTCTCGATGAAATCAGATGTCTTTAGTTATGGAGTGATAGTTCTTGAAATTGTAACCGGAAAGAAGAATAGAGAATTTTTAGACCCAGAACACTCCCACAATCTTCTTGGACATGCATGGAGACTTTGGACAGAAGGGAGACAACTAGAACTACTAGATGAAATGTTATGGGAAAAATGCACAACTTCTCAAGTCATGCGATGTATACAAGTGGGTTTATTATGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCATCAGTACTTTTAATGTTGAATGGTGGAAAAATATTGCCTAAGCCAAAGATTCCTGGATTTTACATTGAAAGAGATCTTACTCCCGAAGATGCTTTGTTGAAAAATTGTGCAATGTTCTTGCCAAATGAAATGACTATTACAACATTAGAGGCAAGATAG 2451 0.3623 MLHIWFLLFLYIRTCTSFDSLTSNQSLKDGQTLVSSDGTFELGFFSPRDSTNRYLGLWFRNVSPQKLVWVANRESPLNNSRGFLRINSEGVLIVLNGTNSTTVWSSNVTTKEVNNPIARLLDSGNLVVQNGKNTKGDHFLWQSFDYLCDTLLLNGTKLGWDLVTGHEIFLSSWKKNDDPSIGEYSLRIYRKGYPQLFKFKGLERKFRIGSWNGVSLSGYPTQLLKQLHRFRFVFDEKQVYIESETLDRSIMAIYRLTPLGHGELSVRTSKTRNWRVISTGEEDECENYALCGTYSICIMDGNFPTCECMKGYVPKFPKQWNISYWSNGCVPKNKSNCENSYKDGFLRYSKMKLPDTSSSLFSKIMDLEECRNSCLENCSCSAYANLDIRNGGSGCLLWFDELVDVRKFSKWGQDLYVRVPASQLDHLLINDSSSNKQKLVGITVGAISFGLMATCICIMIYIKRGRIFYKNHYENIFKREDTDPQTFDFQIIAQATGNFSRSNKLGEGGFGPVYKGTLRCGQVLAIKRLSNDSGQGLEEFKNEIAVIAKLQHRNLVKLLGYCIQGEEVMLIYEYMANKSLDNFIFDENKRKMLDWSKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDANFETKISDFGLARTLLGDQVEEKTKRVAGTYGYMSPEYAVRGRFSMKSDVFSYGVIVLEIVTGKKNREFLDPEHSHNLLGHAWRLWTEGRQLELLDEMLWEKCTTSQVMRCIQVGLLCVQQRPEDRPDMSSVLLMLNGGKILPKPKIPGFYIERDLTPEDALLKNCAMFLPNEMTITTLEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02302 816 CDD EGF_CA 283 315 - -
Trre15g02302 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 574 - -
Trre15g02302 816 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02302 816 Gene3D Hepatocyte Growth Factor 336 416 - -
Trre15g02302 816 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Trre15g02302 816 Pfam PAN-like domain 337 405 IPR003609 -
Trre15g02302 816 ProSiteProfiles Protein kinase domain profile. 499 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02302 816 Pfam D-mannose binding lectin 67 174 IPR001480 -
Trre15g02302 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 419 - -
Trre15g02302 816 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Trre15g02302 816 CDD STKc_IRAK 505 772 - -
Trre15g02302 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 13 144 - -
Trre15g02302 816 ProSiteProfiles Bulb-type lectin domain profile. 18 141 IPR001480 -
Trre15g02302 816 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Trre15g02302 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 179 IPR036426 -
Trre15g02302 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Trre15g02302 816 SMART blect_4 24 147 IPR001480 -
Trre15g02302 816 Gene3D - 14 144 IPR036426 -
Trre15g02302 816 CDD PAN_AP_plant 334 420 - -
Trre15g02302 816 SUPERFAMILY Protein kinase-like (PK-like) 482 780 IPR011009 -
Trre15g02302 816 ProSiteProfiles EGF-like domain profile. 281 318 IPR000742 -
Trre15g02302 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 757 - -
Trre15g02302 816 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Trre15g02302 816 SMART ntp_6 340 419 IPR003609 -
Trre15g02302 816 Gene3D Phosphorylase Kinase; domain 1 465 574 - -
Trre15g02302 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Trre15g02302 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Trre15g02302 816 CDD B_lectin 24 146 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02302 Trre-Chr15 19004156 19010857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02302 451 787 Receptor kinase-like Gene Family AT4G23230 53.216 1.31e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02302 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02302 - - gmx:100790261 1072.77