Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02299 ATGGCCACTCCACTTTTCATGCCATTTGTTGTAATGTTACTATTGTTTTCCTCCCAAATTTCCTCTGATACAGATATCATAACTCAGTTTCATTCTCTTCATGATGGAACTACTAGAACATTGGTTAATGGAACATTTGAGTTGGGTTTCTTTAGTCCAGGTAGTTCCACAAATCGCTATGTAGGAATATGGTTCAAGAATATCCCTATAAAAACGGTTGTTTGGGTAGCCAATCGTGACCATCCAATTAGTGACAAATCCGGCATATTGAGCATAAACAAAGAAGGAAACCTTGTCCTTTACAGCAAAAATGGCACAACTCATTGGTCAACAAATATAACGACCAAATCGTCAACCTCAAGCTTCATAGCACGGCTCTTAGGTACTGGAAACTTGGTCCTAAATGATGAGAAAGAAAATAACAGTTATGATGTGTACTTGTGGCAGAGCTTTGACTATCTTACCGATACATTTCTACCAGGAATGAAGGTTGGGTGGAACCTAACAAGCGGCCTTAATAGGCGCCTAACAGCTTGGAACAATTGGGACGACCCTTCTTCAGGTCAAATTACTTATGGCGTGATAAGAAGTGACATTCCCGAAACAAGGATTCAAAATGGTTCATCAGTTTTATATAGAAGTGGACCTTATAATGGCCTTCATTTGGGTGCTGCACAAAAATTGAAACATGTTCCATTATTCATTCTCAATTTTAAAACGGATGAGTATTATTTCACTTACCAACCCAGGAATCAGTCGTTACTCTCAAGATTTGTCATCAACCAAACTGTTTCTACTCTTCAGATCTTAACGTGGACTGAAGGGAACCAAACATGGATGGTTCATTCACATATTCCGAGAGATGAATGTGATGACTACAACCGTTGTAGTTCGTTTGGGATCTGTGGCATGATGAGTAAGTCCTCCATGTGCGAGTGCTTAAGTGGATTCACTCCAAAATCACCTCAAAATTGGAATGTGAAGGACTGGAGTCAAGGATGCGTGCGGAGTGAAAATTGGAGCTGTAGAGAGAAAAATAAAGACGGGTTCATCAAATTTCAAAATATGAAGGTCCCGGACACTAAGATATCTTGGACAAATAGAAGTATGACACTTGAGAAATGTAAGACCAAATGTTGGGAGAATTGTTCCTGTACAGCTTATGCTAACTCAAATATCATTGAAGATGGAAGTGGTTGCATCCTCTGGTTCGGTGATCTCTTGGACTTGAGACAATTACCTGATTCTGGGCAAGATCTATATGTTAGATCCCATACCTCGGAAATAGAGGAAATAGGAAGCATGAAGACTACAATAAAGAAAGGTGAAGGTGAACAAGAAGACATGGAGCTACCTTCCTTTGACTTTGGTAGAATAGCATTTGCCACTGATGACTTCTCAAATAATAACAAGCTTGGCGAAGGTGGTTTTGGTCCAGTGTATAGGGGAACATTACCAGATGGACAAGATATCGCAGTTAAAAGGCTTTCACATAGCTCCAAACAAGGAATAAAAGAATTTAAGAATGAGGTTATATTTTGTTCCAAACTCCAACATCGAAACCTAGTTAAAGTCCTTGGCTTTTGCATTGAACAAGGAGAGAAACTACTCATCTATGAATATATGCCCAATAAAAGCTTAGACTTCTTTCTTTTCGATTCATCTCGAAGTAAATTTTTAGATTGGTCTAAGCGGTTTGACATTATCGGCGGTATTGCTAGAGGAATTCTTTACCTTCACCAGGACTCTAGACTAAGGGTCATACATAGAGATTTAAAAGCAGGTAATGTTTTATTAGATAATGATATGAGTCCCAAAATTGCTGATTTTGGCCTGGCTCGAATGTGTGGAGGTGACCAGATTCAAGGAAACACAAGTATAGTTGTCGGTACATATGGTTATATGGCACCCGAATATGCAATTGATGGGATATTCTCCATCAAATCAGATGTATATAGTTTTGGAATTTTGTTATTAGAGATTATAAGTGGAAAGAAAAATAAAGGACTTTCCTATTCAAATCACAGTTACAATCTTGTTTCTCATGCATGGAGATTGTGGAAAGAGTGCACCCCAATGGAATTCATCGATACTTGTTTGGAGAAGGGTTCATATATCTCATCTGAAGTCTTGAGATGCATTCATATTGGTCTTTTATGTGTTCAACACGATCCTAGTGATAGACCAACTATGACATCTGTGCTTGTAATGCTAACTAACGATAATACTTTACCACAACCGAAAGAGCCTATCTTCTTAACTGAAAAGGTTTCAGATGGGAAAGAATCTACTTCTGGACAAGAAATGTACAATTTAACAAATGAAGAATCTGTGTCAATATTGGAACCTAGATAG 2355 0.3826 MATPLFMPFVVMLLLFSSQISSDTDIITQFHSLHDGTTRTLVNGTFELGFFSPGSSTNRYVGIWFKNIPIKTVVWVANRDHPISDKSGILSINKEGNLVLYSKNGTTHWSTNITTKSSTSSFIARLLGTGNLVLNDEKENNSYDVYLWQSFDYLTDTFLPGMKVGWNLTSGLNRRLTAWNNWDDPSSGQITYGVIRSDIPETRIQNGSSVLYRSGPYNGLHLGAAQKLKHVPLFILNFKTDEYYFTYQPRNQSLLSRFVINQTVSTLQILTWTEGNQTWMVHSHIPRDECDDYNRCSSFGICGMMSKSSMCECLSGFTPKSPQNWNVKDWSQGCVRSENWSCREKNKDGFIKFQNMKVPDTKISWTNRSMTLEKCKTKCWENCSCTAYANSNIIEDGSGCILWFGDLLDLRQLPDSGQDLYVRSHTSEIEEIGSMKTTIKKGEGEQEDMELPSFDFGRIAFATDDFSNNNKLGEGGFGPVYRGTLPDGQDIAVKRLSHSSKQGIKEFKNEVIFCSKLQHRNLVKVLGFCIEQGEKLLIYEYMPNKSLDFFLFDSSRSKFLDWSKRFDIIGGIARGILYLHQDSRLRVIHRDLKAGNVLLDNDMSPKIADFGLARMCGGDQIQGNTSIVVGTYGYMAPEYAIDGIFSIKSDVYSFGILLLEIISGKKNKGLSYSNHSYNLVSHAWRLWKECTPMEFIDTCLEKGSYISSEVLRCIHIGLLCVQHDPSDRPTMTSVLVMLTNDNTLPQPKEPIFLTEKVSDGKESTSGQEMYNLTNEESVSILEPR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02299 784 ProSiteProfiles Protein kinase domain profile. 466 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02299 784 Gene3D Phosphorylase Kinase; domain 1 428 541 - -
Trre15g02299 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 746 - -
Trre15g02299 784 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Trre15g02299 784 SMART serkin_6 466 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02299 784 CDD EGF 289 318 - -
Trre15g02299 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 431 541 - -
Trre15g02299 784 MobiDBLite consensus disorder prediction 758 778 - -
Trre15g02299 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Trre15g02299 784 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 726 - -
Trre15g02299 784 Pfam D-mannose binding lectin 72 179 IPR001480 -
Trre15g02299 784 CDD PAN_AP_plant 341 423 - -
Trre15g02299 784 MobiDBLite consensus disorder prediction 758 784 - -
Trre15g02299 784 Pfam PAN-like domain 342 410 IPR003609 -
Trre15g02299 784 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Trre15g02299 784 Gene3D - 18 151 IPR036426 -
Trre15g02299 784 PIRSF SRK 1 445 IPR024171 GO:0004674
Trre15g02299 784 PIRSF SRK 430 784 IPR024171 GO:0004674
Trre15g02299 784 Gene3D Hepatocyte Growth Factor 341 422 - -
Trre15g02299 784 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Trre15g02299 784 Pfam Protein tyrosine and serine/threonine kinase 469 736 IPR001245 GO:0004672|GO:0006468
Trre15g02299 784 CDD STKc_IRAK 472 740 - -
Trre15g02299 784 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Trre15g02299 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Trre15g02299 784 SMART blect_4 32 154 IPR001480 -
Trre15g02299 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Trre15g02299 784 SMART ntp_6 345 424 IPR003609 -
Trre15g02299 784 Gene3D Transferase(Phosphotransferase) domain 1 542 749 - -
Trre15g02299 784 CDD B_lectin 32 153 IPR001480 -
Trre15g02299 784 SUPERFAMILY Protein kinase-like (PK-like) 449 738 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02299 Trre-Chr15 18989251 18992999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02299 443 752 Receptor kinase-like Gene Family AT4G23230 59.807 3.62e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02299 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02299 - - cic:CICLE_v10010282mg 843.188