Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02298 ATGGCCACTCCACTTTTCATGCCATTTGTTGTAATGTTACTATTGTTTTCCTCCCAAATTTCCTCTGATACAGATATCATAACTCAGTTTCATTCTCTTCATGATGGAACTACTAGAACATTGGTTAATGGAACATTTGAGTTGGGTTTCTTTAGTCCAGGTAGTTCCACAAATCGCTATGTAGGAATATGGTTCAAGAATATCCCTATAAAAACGGTTGTTTGGGTAGCCAATCGTGACCATCCAATTAGTGACAAATCCGGCATATTGAGCATAAACAAAGAAGGAAACCTTGTCCTTTACAGCAAAAATGGCACAACTCATTGGTCAACAAATATAACGACCAAATCGTCAACCTCAAGCTTCATAGCACGGCTCTTAGGTACTGGAAACTTGGTCCTAAATGATGAGAAAGAAAATAACAGTTATGATGTGTACTTGTGGCAGAGCTTTGACTATCTTACCGATACATTTCTACCAGGAATGAAGGTTGGGTGGAACCTAACAAGCGGCCTTAATAGGCGCCTAACAGCTTGGAACAATTGGGACGACCCTTCTTCAGGTCAAATTACTTATGGCGTGATAAGAAGTGACATTCCCGAAACAAGGATTCAAAATGGTTCATCAGTTTTATATAGAAGTGGACCTTATAATGGCCTTCATTTGGGTGCTGCACAAAAATTGAAACATGTTCCATTATTCATTCTCAATTTTAAAACGGATGAGTATTATTTCACTTACCAACCCAGGAATCAGTCGTTACTCTCAAGATTTGTCATCAACCAAACTGTTTCTACTCTTCAGATCTTAACGTGGACTGAAGGGAACCAAACATGGATGGTTCATTCACATATTCCGAGAGATGAATGTGATGACTACAACCGTTGTAGTTCGTTTGGGATCTGTGGCATGATGAGTAAGTCCTCCATGTGCGAGTGCTTAAGTGGATTCACTCCAAAATCACCTCAAAATTGGAATGTGAAGGACTGGAGTCAAGGATGCGTGCGGAGTGAAAATTGGAGCTGTAGAGAGAAAAATAAAGACGGGTTCATCAAATTTCAAAATATGAAGGTCCCGGACACTAAGATATCTTGGACAAATAGAAGTATGACACTTGAGAAATGTAAGACCAAATGTTGGGAGAATTGTTCCTGTACAGCTTATGCTAACTCAAATATCATTGAAGATGGAAGTGGTTGCATCCTCTGGTTCGGTGATCTCTTGGACTTGAGACAATTACCTGATTCTGGGCAAGATCTATATGTTAGATCCCATACCTCGGAAATAGCAAACCGAGATGGTTCACGGAAAATGGTAGCTGTGGTCACAAGTACCACTTCATTAATTATTGTGATGCTTTTGCTATTTATCATACTTCTTTGTTGGAGGAGAAAAGCCAAATCTAAATCTAGAGAGGAAATAGGAAGCATGAAGACTACAATAAAGAAAGGTGAAGGTGAACAAGAAGACATGGAGCTACCTTCCTTTGACTTTGGTAGAATAGCATTTGCCACTGATGACTTCTCAAATAATAACAAGCTTGGCGAAGGTGGTTTTGGTCCAGTGTATAGGGGAACATTACCAGATGGACAAGATATCGCAGTTAAAAGGCTTTCACATAGCTCCAAACAAGGAATAAAAGAATTTAAGAATGAGGTTATATTTTGTTCCAAACTCCAACATCGAAACCTAGTTAAAGTCCTTGGCTTTTGCATTGAACAAGGAGAGAAACTACTCATCTATGAATATATGCCCAATAAAAGCTTAGACTTCTTTCTTTTCGATTCATCTCGAAGTAAATTTTTAGATTGGTCTAAGCGGTTTGACATTATCGGCGGTATTGCTAGAGGAATTCTTTACCTTCACCAGGACTCTAGACTAAGGGTCATACATAGAGATTTAAAAGCAGGTAATGTTTTATTAGATAATGATATGAGTCCCAAAATTGCTGATTTTGGCCTGGCTCGAATGTGTGGAGGTGACCAGATTCAAGGAAACACAAGTATAGTTGTCGGTACATATGGTTATATGGCACCCGAATATGCAATTGATGGGATATTCTCCATCAAATCAGATGTATATAGTTTTGGAATTTTGTTATTAGAGATTATAAGTGGAAAGAAAAATAAAGGACTTTCCTATTCAAATCACAGTTACAATCTTGTTTCTCATGCATGGAGATTGTGGAAAGAGTGCACCCCAATGGAATTCATCGATACTTGTTTGGAGAAGGGTTCATATATCTCATCTGAAGTCTTGAGATGCATTCATATTGGTCTTTTATGTGTTCAACACGATCCTAGTGATAGACCAACTATGACATCTGTGCTTGTAATGCTAACTAACGATAATACTTTACCACAACCGAAAGAGCCTATCTTCTTAACTGAAAAGGTTTCAGATGGGAAAGAATCTACTTCTGGACAAGAAATGTACAATTTAACAAATGAAGAATCTGTGTCAATATTGGAACCTAGATAG 2481 0.3821 MATPLFMPFVVMLLLFSSQISSDTDIITQFHSLHDGTTRTLVNGTFELGFFSPGSSTNRYVGIWFKNIPIKTVVWVANRDHPISDKSGILSINKEGNLVLYSKNGTTHWSTNITTKSSTSSFIARLLGTGNLVLNDEKENNSYDVYLWQSFDYLTDTFLPGMKVGWNLTSGLNRRLTAWNNWDDPSSGQITYGVIRSDIPETRIQNGSSVLYRSGPYNGLHLGAAQKLKHVPLFILNFKTDEYYFTYQPRNQSLLSRFVINQTVSTLQILTWTEGNQTWMVHSHIPRDECDDYNRCSSFGICGMMSKSSMCECLSGFTPKSPQNWNVKDWSQGCVRSENWSCREKNKDGFIKFQNMKVPDTKISWTNRSMTLEKCKTKCWENCSCTAYANSNIIEDGSGCILWFGDLLDLRQLPDSGQDLYVRSHTSEIANRDGSRKMVAVVTSTTSLIIVMLLLFIILLCWRRKAKSKSREEIGSMKTTIKKGEGEQEDMELPSFDFGRIAFATDDFSNNNKLGEGGFGPVYRGTLPDGQDIAVKRLSHSSKQGIKEFKNEVIFCSKLQHRNLVKVLGFCIEQGEKLLIYEYMPNKSLDFFLFDSSRSKFLDWSKRFDIIGGIARGILYLHQDSRLRVIHRDLKAGNVLLDNDMSPKIADFGLARMCGGDQIQGNTSIVVGTYGYMAPEYAIDGIFSIKSDVYSFGILLLEIISGKKNKGLSYSNHSYNLVSHAWRLWKECTPMEFIDTCLEKGSYISSEVLRCIHIGLLCVQHDPSDRPTMTSVLVMLTNDNTLPQPKEPIFLTEKVSDGKESTSGQEMYNLTNEESVSILEPR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02298 826 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Trre15g02298 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 788 - -
Trre15g02298 826 MobiDBLite consensus disorder prediction 800 826 - -
Trre15g02298 826 CDD STKc_IRAK 514 782 - -
Trre15g02298 826 Gene3D Hepatocyte Growth Factor 341 422 - -
Trre15g02298 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 583 - -
Trre15g02298 826 MobiDBLite consensus disorder prediction 800 820 - -
Trre15g02298 826 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Trre15g02298 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Trre15g02298 826 CDD EGF 289 318 - -
Trre15g02298 826 Pfam D-mannose binding lectin 72 179 IPR001480 -
Trre15g02298 826 Gene3D Transferase(Phosphotransferase) domain 1 584 791 - -
Trre15g02298 826 Pfam PAN-like domain 342 410 IPR003609 -
Trre15g02298 826 Gene3D - 18 151 IPR036426 -
Trre15g02298 826 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Trre15g02298 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Trre15g02298 826 CDD PAN_AP_plant 341 423 - -
Trre15g02298 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Trre15g02298 826 SUPERFAMILY Protein kinase-like (PK-like) 492 780 IPR011009 -
Trre15g02298 826 SMART serkin_6 508 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02298 826 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Trre15g02298 826 ProSiteProfiles Protein kinase domain profile. 508 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02298 826 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Trre15g02298 826 SMART blect_4 32 154 IPR001480 -
Trre15g02298 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 768 - -
Trre15g02298 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Trre15g02298 826 SMART ntp_6 345 424 IPR003609 -
Trre15g02298 826 CDD B_lectin 32 153 IPR001480 -
Trre15g02298 826 Pfam Protein tyrosine and serine/threonine kinase 511 778 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02298 Trre-Chr15 18989251 18992999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02298 438 794 Receptor kinase-like Gene Family AT4G23230 55.028 2.57e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02298 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02298 - - gmx:100792537 1027.7