Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02295 ATGATTGATAACATAACAGTGTTGTTCTGTTTGTTCTTTCTATTATGTTCTTACATGAGAACAAGCACTTCACTTGACAGTTTATCTATGAATCAATCCATCAAAGATGGTGAGACGTTAGTTTCGGCTAATGGAACTTTTGAAATGGGTTTCTTCAGTCCTGGAAATTCAAAAGGTAGATATTTGGGTATGTGGTATAAGAAGTTAACCCCTTTAACTGTTCTATGGGTGGCTAATAGGGAAACACCAGTGTACAATAACTCAGGAGTATTAAAACTCGATGAAAACGGCGTTCTTGTCGTTCTCAATGGAGAAAACAACACCACTGTTTGGTCCTCCAACGTATCGAATAAAGTAGTCGTCAATAATTCAGTAACTGCACAGTTCTTGGAAACGGGAAATCTTGTGTTGAAAAATGGGAAGGATAATATTGTGTGGCAGAGTTTTGATTATCCAACTGATACTTTCATGCCGGGAATGAAGATTGGATGGAACTTAGTAACCGGTCTAAACAAGAACCAAACGTCGTGGAAGAGTGCAGATGATCCTGCAAAGGGAGAATATGTTAGTGCTATTGACCTCAGAGGATATCCCCAAGCAGTTATTTTGAAGGAATCTGTCATAAGATTGAGAATAGGATCATGGAACGGACGCGCTTTTACTGGATATCCGACACAGCCGTTGAAAGAAAAGCAAAGGTTTGAATTTGTCATAACTGACAAAGAAGTGTATCATAGTTTTGAAGTTATTGATAGCTCTATAATTTGCATATATAAATTGTCCCTTTTAGGAAATTTGCAAGCTTTATGTTGGACAAGTCAATCAAGCTCTAGGATAATTATATACACCGGCGCAGAAGATTCGTGTGATAATTATGCTATGTGTGGTGCTAATAGTATATGTAATATGGATGGTAATGTTCCTAAGTGTGAATGCCTGAAAGGTTATGTTCCTAAATTTCCTGAACAATGGAATATATCGTATTGGTCTAGCGGTTGTATTCCAAAAATTATATCGTTTTGCGGAAACAATAACACAAGTGGATTCTTCAAGTACAGAGAAATGAAATTGCCAGACACGTCTTCATCATGGTATAATACGACTATGAATCTTGTGGAGTGTCAGCAGACATGTATGAAAAATTGTTCGTGTACAGCTTATGCATATCTGGATATCCGAAATGGAGGAAGTGGTTGTCTTCTTTGGTTTGGTGATCTGGTTGACATGAGAGTATTCTCCCAATGGGGACAAGACCTCTTTATCAGAGTCCCTTCTTCAGAACTAGACTACCTTAGTGTCGATGCCTTTCGAAGCAAGAAAAAGCAGCTGATGCGGATCATACTTGTCTTGATTACTGTTGGATTTTTCACATGTGCCTGCATAGTGATATGTATAAGGAGAGTGGCACAGAGAGGATACCATCTTGCACCATTTCAAAAGCGGAAACTATATTGTAAATTGAAAAAGGAAGACATGGATCTGCCAATATTTGAATTTTCAGATCTTGTTAAAGCCACTAATAACTTTTCTAGCGTAAATAAAATCGGGGAAGGAGGATTTGGACCAGTGTATAAGGGTACACTCGTAGAAGGGAAGGAGGTAGCCATAAAACGACACTCAAAAGTGTCGGATCAAGGATTGGAAGAGTTTAAAAATGAAATTGTGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTCTAGCCATAAAGAGGAAATGTTGTTGATGTATGAATACATGCCCAACAAGAGCTTAGACTACTTTATCTTTGATGAAACGAGAAGCAAGCTCCTGGCTTGGACTCACCGTTCCAACATTATCGTTGGCATTGCTAAAGGACTTCTTTATCTTCACCAAGACTCTACACTCAGAATTATTCATAGAGATTTGAAAACCAGCAATATCCTGTTAGATGCCCATATGAATCCAAAAATCTCGGATTTTGGCTTGGCTCGGATATTTGTTGGAGAACAACTTGAAGCCAAAACAAGAAAAATGGTTGGGACATATGGTTACATGCCTCCAGAGTATGTTGTACATGGTCGTTACTCTATGAAATCAGATGTGTTTAGTTTTGGCGTAATAGTATTGGAGATAATTAGTGGGAAAAAGATCAAGGGCTTTTATGACCCAACACACTCTCTCAACCTTCTTGGATATGCTTGGAGACTCTGGATTGAAAACATGCCATTGGAACTACTAGATACACATTTACTTGATATGTGCATTTCTTCTGAAATCATACGATGCATACACGTGGGGCTATTATGCGTACAACAAAAACCCGAAGATAGGCCATGCATGTCCTCTGTCATTCTTATGTTGAATGGTGAGAAATTATTGCCTCAACCGAAGGCTCCTGGATTTTATACCGGTAAGGGTTCAAGTGAAATCCCGTCCTCTTCCTCAAATCATATGTCACTTACAATTTTTGAGGCAAGATAG 2460 0.3854 MIDNITVLFCLFFLLCSYMRTSTSLDSLSMNQSIKDGETLVSANGTFEMGFFSPGNSKGRYLGMWYKKLTPLTVLWVANRETPVYNNSGVLKLDENGVLVVLNGENNTTVWSSNVSNKVVVNNSVTAQFLETGNLVLKNGKDNIVWQSFDYPTDTFMPGMKIGWNLVTGLNKNQTSWKSADDPAKGEYVSAIDLRGYPQAVILKESVIRLRIGSWNGRAFTGYPTQPLKEKQRFEFVITDKEVYHSFEVIDSSIICIYKLSLLGNLQALCWTSQSSSRIIIYTGAEDSCDNYAMCGANSICNMDGNVPKCECLKGYVPKFPEQWNISYWSSGCIPKIISFCGNNNTSGFFKYREMKLPDTSSSWYNTTMNLVECQQTCMKNCSCTAYAYLDIRNGGSGCLLWFGDLVDMRVFSQWGQDLFIRVPSSELDYLSVDAFRSKKKQLMRIILVLITVGFFTCACIVICIRRVAQRGYHLAPFQKRKLYCKLKKEDMDLPIFEFSDLVKATNNFSSVNKIGEGGFGPVYKGTLVEGKEVAIKRHSKVSDQGLEEFKNEIVLIAKLQHRNLVKLLGCSSHKEEMLLMYEYMPNKSLDYFIFDETRSKLLAWTHRSNIIVGIAKGLLYLHQDSTLRIIHRDLKTSNILLDAHMNPKISDFGLARIFVGEQLEAKTRKMVGTYGYMPPEYVVHGRYSMKSDVFSFGVIVLEIISGKKIKGFYDPTHSLNLLGYAWRLWIENMPLELLDTHLLDMCISSEIIRCIHVGLLCVQQKPEDRPCMSSVILMLNGEKLLPQPKAPGFYTGKGSSEIPSSSSNHMSLTIFEAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02295 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Trre15g02295 819 Pfam Protein kinase domain 510 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02295 819 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Trre15g02295 819 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Trre15g02295 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 788 - -
Trre15g02295 819 CDD STKc_IRAK 515 782 - -
Trre15g02295 819 SMART ntp_6 344 423 IPR003609 -
Trre15g02295 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Trre15g02295 819 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Trre15g02295 819 CDD PAN_AP_plant 341 424 - -
Trre15g02295 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Trre15g02295 819 Gene3D Phosphorylase Kinase; domain 1 474 584 - -
Trre15g02295 819 Pfam PAN-like domain 341 409 IPR003609 -
Trre15g02295 819 SMART blect_4 31 152 IPR001480 -
Trre15g02295 819 ProSiteProfiles Bulb-type lectin domain profile. 25 150 IPR001480 -
Trre15g02295 819 SUPERFAMILY Hairpin loop containing domain-like 344 414 - -
Trre15g02295 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 423 - -
Trre15g02295 819 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre15g02295 819 CDD B_lectin 31 152 IPR001480 -
Trre15g02295 819 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02295 819 MobiDBLite consensus disorder prediction 799 819 - -
Trre15g02295 819 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Trre15g02295 819 SMART serkin_6 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02295 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 584 - -
Trre15g02295 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 770 - -
Trre15g02295 819 MobiDBLite consensus disorder prediction 797 819 - -
Trre15g02295 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Trre15g02295 819 SUPERFAMILY Protein kinase-like (PK-like) 492 795 IPR011009 -
Trre15g02295 819 Gene3D - 20 149 IPR036426 -
Trre15g02295 819 Gene3D Hepatocyte Growth Factor 341 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02295 Trre-Chr15 18968957 18972243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02295 447 795 Receptor kinase-like Gene Family AT4G23190 53.760 1.89e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02295 Pkinase 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02295 - - aprc:113865090 1055.05