Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02294 ATGTCCGAACTTGACTCACCCCTCTGGATTAAGAGTCTAGACACCGGGAAAGATGTGCTTAACAATGAAGAGTATGCGGGGATTGGTTCTCCTTTTAACACTCTGATACCAAATGGTTATGCAACTGAATATATAAGAGAAATCAGGCTGTTATACACCAACAGTGCGGCTCTCATGGAAACATTCCTAGACGCAGACCGGTGGTCGAAGATGTTCCCATGTATGATTGCTCAAGCTGCAACCTTGGATGTATTATCTAATGGAATGGGTGGAACCATAAATGGATCTATGCAAATGGATCACTTGGGTGGATCATTCTCGATATGTTTTGTCGACCCATAG 342 0.4327 MSELDSPLWIKSLDTGKDVLNNEEYAGIGSPFNTLIPNGYATEYIREIRLLYTNSAALMETFLDADRWSKMFPCMIAQAATLDVLSNGMGGTINGSMQMDHLGGSFSICFVDP 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02294 113 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 99 IPR042160 -
Trre15g02294 113 Pfam START domain 3 93 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02294 Trre-Chr15 18967756 18968097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02294 1 99 Homeobox Transcription Factor Family AT4G00730 46.465 2.34e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02294 K09338 - tpra:123905936 124.79