Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02289 ATGAAAATTCTCTATACCATGCTTGTTATTACTAAGCTAATATTATTATTTTTCTTCAAATTTTCCTCTGCTGCTGATACTATTAAACAATCAGAATCACTTCTTGATGGAAGCACCTTGATTTCTAATGATGGAACCTTTGAGTTGGGTTTTTTTAATCCAGGTAATTCACCAAACCGTTATGTTGGAATTTGGTACAAAAACATTCAAGTTAAAACAGTTGTTTGGGTCGCGAATCGTGATAATCCGATCAAAGATAACTCGGCCAAGTTGATCATAAACAAACAAGGAAATCTTGTTCTTCTCAATAATAGTGATTCTCTTTTATGGTCAACAAATGCAACAAAGAAAGCTTCAATTCCAATTGTGCAGCTTTTGGACAATGGAAATTTAGTTCTTCGAGATGAGAAAGACGATGAAAGTGAAGATGAAGATGGTTTCTTGTGGCAGAGTTTTGATTATCCTTGTGATACATTATTACCAGGAATGAAGTTGGGATGGGACAAGAAAACCGGTATTAATAGGCGTCTCACTGCATGGAAAAATTGGGACGATCCGTCTTCAGGTGAATTTACTAATTCGATTAAACTTAACAAAAATCCAGAAATTGTGATGTGGAAAGGTTCTGTTGAATTTTATAGAACAGGACCAATGATTGGTGTTATGAATCATAGTCACACGGTTCGCAATTCGTTTCGTGCTGTTATGTCCAAAGGAGTTTTCGGGTTGAGGCCTAATCCACTTTATAATTATACATTTGTATATAATGATGAGGAAGTGTATTATATGTATAACCTTAAGAACAGTTCTGTGATTTCCATAGTTGTTTTGAACCAAACACTTTTGGTTCGTCAACGCCTCACTTGGATTCCGGAAACTAAAACATGGACTCTGTACCAGAATTTGCCACAAGATAGGTGTGATGCTTATAATGTTTGTGGTGCCAACGCAAATTGTGCCATTGGCGAATCACCAATTTGTCAGTGCTTAGATGGGTTTACGCCAAAATCACCTGATCGATGGAATGCAATGGATTGGTCATTAGGATGTGTTCGGATTGGAAATTGGACCTGTGGAGTCAAGAGTAGAGACGGTTTCCGTAGAGTTGCTAAAATGAAGTTGCCGGATACTACAAATTATTGGCTTAACGAAACTATGACGCTCGATAAATGCAAGGATAAATGTTTGCAAAATTGTTCCTGCAAGGCTTACTCAATCTTAAGCGCAAATGATGGAAACAACGGATGTTCCATTTGGTTTGATGATCTTAAAGATTTGAGAGTTTCAGAATCTGGACAAGACTTGTATGTTCGAGGAGACGTTTCAGATATTGATGATAAACATGGGCGTATGAAAAAAGTAATTGTTGCAGTTTCAATCAGTACTTCATTAGTCATTGTGATGCTATTAGCATTCTACATTTATAGAACAAAGTATAAAGTTAATGAGGACAAGGTAAACTCAATGTGGATTGATGACACTAGTGAAAGTGAACATGATGATTTCGAGCTTCCTTTCTTTGATCTTGTTACAATACTAGAAGCCACAAATAATTTCTCAATTGACAACAAACTCGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTAAGTTGATAGATGGCCAAGAAATTGCAGTTAAAAGGCTTTCTTGGGGTTCTGGACAAGGAACGAAAGAATTTAAGAATGAAGTTATATTATGTTCTAAACTTCAACATCGAAATCTTGTTAAAGTTATTGGTTGTTGCATTGAAAAAGATGAGAGAATGCTAGTTTATGAATATATGTCAAACACAAGCCTTGATTCATTTATTTTTGATTTTGGCTTGGCTAAAATGTGTGGAGGAGACCAAATTGAAGGAAAGACAAATCGAATAATTGGCACATACGGTTATATGGCACCTGAATATGCCATTGATGGATTATTCTCTATTAAATCAGATGTTTTTAGTTTTGGCGTATTATTGCTAGAACTTATAAGTGGAATGAAAAATAGAACACGTACCTACCATCAACATGATCACAATCTTATTGGACATGCATGGAGATTGTGGAAAGAAGGAATGATACACACATTGATTGATGATAATTTGATGGAAACATGCAATTTCAATGAAACTTTAAGGTGCATTCAAATAGGTCTTTTATGTCTACAACATCATCCAGATGATCGACCAAACATGACATCTGTGGTTGTGATGTTAAAAAGTAATAATGCTATACCTCAACCACAAGAGCCAGGTTATTTATTAAAAACTGCACCTATAGAAAGAGAACTTTTTTCTTCTGATGGAGAAACATCATCTTCAATAAATCAAGTAACTATTTCAATATTAGATGTTAGATAG 2346 0.3534 MKILYTMLVITKLILLFFFKFSSAADTIKQSESLLDGSTLISNDGTFELGFFNPGNSPNRYVGIWYKNIQVKTVVWVANRDNPIKDNSAKLIINKQGNLVLLNNSDSLLWSTNATKKASIPIVQLLDNGNLVLRDEKDDESEDEDGFLWQSFDYPCDTLLPGMKLGWDKKTGINRRLTAWKNWDDPSSGEFTNSIKLNKNPEIVMWKGSVEFYRTGPMIGVMNHSHTVRNSFRAVMSKGVFGLRPNPLYNYTFVYNDEEVYYMYNLKNSSVISIVVLNQTLLVRQRLTWIPETKTWTLYQNLPQDRCDAYNVCGANANCAIGESPICQCLDGFTPKSPDRWNAMDWSLGCVRIGNWTCGVKSRDGFRRVAKMKLPDTTNYWLNETMTLDKCKDKCLQNCSCKAYSILSANDGNNGCSIWFDDLKDLRVSESGQDLYVRGDVSDIDDKHGRMKKVIVAVSISTSLVIVMLLAFYIYRTKYKVNEDKVNSMWIDDTSESEHDDFELPFFDLVTILEATNNFSIDNKLGEGGFGPVYKGKLIDGQEIAVKRLSWGSGQGTKEFKNEVILCSKLQHRNLVKVIGCCIEKDERMLVYEYMSNTSLDSFIFDFGLAKMCGGDQIEGKTNRIIGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLELISGMKNRTRTYHQHDHNLIGHAWRLWKEGMIHTLIDDNLMETCNFNETLRCIQIGLLCLQHHPDDRPNMTSVVVMLKSNNAIPQPQEPGYLLKTAPIERELFSSDGETSSSINQVTISILDVR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02289 781 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Trre15g02289 781 Pfam S-locus glycoprotein domain 238 337 IPR000858 GO:0048544
Trre15g02289 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Trre15g02289 781 Gene3D Hepatocyte Growth Factor 357 437 - -
Trre15g02289 781 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 725 - -
Trre15g02289 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 594 - -
Trre15g02289 781 Pfam Domain of unknown function (DUF3403) 739 781 IPR021820 GO:0004674
Trre15g02289 781 Pfam Protein tyrosine and serine/threonine kinase 520 604 IPR001245 GO:0004672|GO:0006468
Trre15g02289 781 PIRSF SRK 604 781 IPR024171 GO:0004674
Trre15g02289 781 PIRSF SRK 1 606 IPR024171 GO:0004674
Trre15g02289 781 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre15g02289 781 SUPERFAMILY Protein kinase-like (PK-like) 502 749 IPR011009 -
Trre15g02289 781 ProSiteProfiles EGF-like domain profile. 303 339 IPR000742 -
Trre15g02289 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 152 - -
Trre15g02289 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 614 739 - -
Trre15g02289 781 ProSiteProfiles Protein kinase domain profile. 519 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02289 781 Pfam PAN-like domain 358 425 IPR003609 -
Trre15g02289 781 SMART ntp_6 361 439 IPR003609 -
Trre15g02289 781 Gene3D Transferase(Phosphotransferase) domain 1 603 749 - -
Trre15g02289 781 SMART blect_4 31 155 IPR001480 -
Trre15g02289 781 Pfam D-mannose binding lectin 73 181 IPR001480 -
Trre15g02289 781 CDD PAN_AP_plant 361 438 - -
Trre15g02289 781 CDD B_lectin 31 155 IPR001480 -
Trre15g02289 781 Gene3D - 20 152 IPR036426 -
Trre15g02289 781 ProSiteProfiles PAN/Apple domain profile. 358 440 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02289 Trre-Chr15 18916365 18919907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02289 445 767 Receptor kinase-like Gene Family AT4G23190 38.402 4.46e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g02289 B_lectin 7.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02289 - - tpra:123915292 1003.05