Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02286 ATGGAACCTCCTCTAGTCTCTCATCAATCACCTGCAACAACATTATGGCACTCTCTTATAATCATTTTACTTTTTACACCCCTCATCATAAAACTTTTGTTCAAACAAAAAAACACTCATAAATCTACAAAACTTGCATTACCTCCAGGTCCTACACCTTGGCCTATAGTAGGTAACATCCCTGAAATGCTAGCAAATAGACCTACATTTAAATGGATACAAAAGATTATGACTGACCTTAACACAGAAGTTATGTGTATCCGTTTAGGTAACATTCCTGTAATTTTTGTTAGCAGTCCAGAAATTGCGCGCGAATTTTTTATAAAACAGGATTCGATTTTTGCTTCAAGACCTATTTATTGGACTAATGAGTATGTTACTGGTGGATATTTAAGCGCGACGCTTAGTCCGTATGGAGAACAATGGAAGAAAATTAAGAAATTAATTAGCAATGAATTAGTTTCACCCTTAAGGCTTAAATGGCTTCAAGATAAGAGAGTGGAAGAAGCCGATAACCTTGTTCGTTGTATTTACAATAAATGTGTTAAAAGTGGTGGAAAAGGTTTGGTGAATGTAAGAATTGCTGCACAACATTATGCTGGGAATGTGATTAGGAGATTGATTTTGAATTTGAGGCATTTTGGAAATGGAAGTGAAGAAATTGGTGAACCTGGTTTAGAGGAAGTGGAATATGTGGAAGCACTTTTTATTGTGTTACAACATTTATTTGCTTATTCTGTTACTGATTACATGCCATGTTTGAGGGGTCTTGATTTGGATGGTCATGAAAGGATTTTGAAAAATGCATGTCAAACTGCAAGGAAATATCATGATCCTATCATTGAAGATAGAATTCAAATGTGGAAGAGTGGAAAAAAGAAAAATAAAGAAGATTTGCTTGATGTTCTTATCTCACTCAAAGATGCACACAACAATGCTCTCTTGTCTAAGCAAGAAATTAAATCTATTGTTTTGGACTTGACACTTGCAGCTGTTGATAACCCATCAAATGCAATTGAATGGGGACTTGCTGAAATGATAAATCAGCCGGAACTACTTAAAAAAGCAACTGAAGAATTAGACAATGTGGTTGGAAAAAGAAGGTTGGTGCAAGAACATGATTTCCCCAAACTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGCTGTCACCCGATTAGCGATTTCAATATTCCCCACGTCTCGATGGAAGACACAATTGTTGCTAATTACTTTATCCCAAAAGGTAGCCATGTGATATTAAGGAGACAAGGACTTGGCCTAAACCCTAGAGTTTGGAAAGAACCACTCAAATTCAAACCAGAACGTCATCTTAAGACTAATGGATCTAATTTGGATTTGGCATTTTCAACTTTGGATTCAGTAACATTTAGCACCGGAAGACGTGGGTGTCCGGGCTTAATGCTTGGAACTTCGATGACTATTATGTTATTTGCAAGGATGCTTCATGGCTTCACTTGGAGTGTGCCCCCCGATCAATCTATTATCGACCTCTCTGAATCACATGGTGGTACCACCAAAGCTAAGCCACTTGTGGCATTGGCAGAGCCTAGGTTACCACCAGAGGCTTATCATTTATTTTAA 1608 0.3744 MEPPLVSHQSPATTLWHSLIIILLFTPLIIKLLFKQKNTHKSTKLALPPGPTPWPIVGNIPEMLANRPTFKWIQKIMTDLNTEVMCIRLGNIPVIFVSSPEIAREFFIKQDSIFASRPIYWTNEYVTGGYLSATLSPYGEQWKKIKKLISNELVSPLRLKWLQDKRVEEADNLVRCIYNKCVKSGGKGLVNVRIAAQHYAGNVIRRLILNLRHFGNGSEEIGEPGLEEVEYVEALFIVLQHLFAYSVTDYMPCLRGLDLDGHERILKNACQTARKYHDPIIEDRIQMWKSGKKKNKEDLLDVLISLKDAHNNALLSKQEIKSIVLDLTLAAVDNPSNAIEWGLAEMINQPELLKKATEELDNVVGKRRLVQEHDFPKLNYVKACAREAFRCHPISDFNIPHVSMEDTIVANYFIPKGSHVILRRQGLGLNPRVWKEPLKFKPERHLKTNGSNLDLAFSTLDSVTFSTGRRGCPGLMLGTSMTIMLFARMLHGFTWSVPPDQSIIDLSESHGGTTKAKPLVALAEPRLPPEAYHLF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02286 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Trre15g02286 535 Gene3D Cytochrome P450 32 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 SUPERFAMILY Cytochrome P450 48 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 Pfam Cytochrome P450 48 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g02286 535 PANTHER CYTOCHROME P450 98A9 22 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02286 Trre-Chr15 18885983 18888706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02286 18 532 Cytochrome P450 AT5G05260 50.962 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02286 - K12153 adu:107486438 633.254