Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02277 ATGGAGACAGAAAGCCAGCTCCAAGTTTCATCAAATTCAGGGCAGCTCAAAGAAGGAACCTCTTTTTTCAAAGCTTGTTTCAATGGTGTCAACACCTTGGCAGGAATTGGGATGCTCTCAATGCCATATGCAATTTCACAAGGAGGGTGGTTGAGTTTTATGATGCTATTTATTTTTGCTATGATATGTTGGTACACTGCTTTACTTCTAGAAAGGTGTATGATTCAACAACCACTAATCAAATCCTATGTTGATATAGGTGAGGTTGCTTTTGGTTACAAAGGAAGAGCTGTGATAGCAAGTTTTATATATTTAGAGTTATTTTTAATTTCTGTTGAGCTTCTTATATTGGTAGGTGACAATTTGGAGAAATTGTTTCCAAATATGAGTCTCACAATTATTGGATTTAAAATTGGAAGTAAAACATGTTTTGTGTTAATCACTGCTTTGGTAGTGTTACCAACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCCTACATATCTGTTGGTGGTATATTTGCTTCAATTATTTTAATTGGTTGTGTTTTGTGGGTGGGAGAAGTTGATGGTGTTGGATTTCATGAAGGAGGGAAATTAGTTAATTTGGGAGGATTATCTACTGCTATGAGCCTTTTTGCTTTCTGTTACTGTGCTCATGCAATATTGCCAACAATATGTAATTCTATGAAGGATAGAAAGCAATTTTCCAAGGTTTTGCTGGTTTGTTTTGTGGCAAGCACCACTATCTATGGAACTGTAGCGGTTTTAGGGTACACAATGTTTGGAAATCATTTGAAGTCTCAGATCACATTAAATCTACCAACTAATGCAATAAGTACAAAAATAGCAATATATACCACAATAATAAATCCTTTCACCAAGTATCCAATTGTAATCACTCCAATAACCAATGCCATTGAGGAAAAATGGCATCTATGCAAGAGCAGACCAGTAAGCATTCTCATTAGAACAACAATTGTGGTCAGCAGTGTACTTGTGGCACTATTTGTTCCATTTTTTGGATACATTATGGCATTTATTGGTGCTTTCTTGAGTGTGGCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATTCACAAAGCTGCAAGGAGATTTGGGTTAGAGTTGATCATTATCATAGGAATTCTGATCATTGCTACACTTATTGGAATACATGGTACCTACACTTCACTTGTGAAAATAGCAAATAGTATGAAGTCATGA 1230 0.3585 METESQLQVSSNSGQLKEGTSFFKACFNGVNTLAGIGMLSMPYAISQGGWLSFMMLFIFAMICWYTALLLERCMIQQPLIKSYVDIGEVAFGYKGRAVIASFIYLELFLISVELLILVGDNLEKLFPNMSLTIIGFKIGSKTCFVLITALVVLPTTWLRSLGALAYISVGGIFASIILIGCVLWVGEVDGVGFHEGGKLVNLGGLSTAMSLFAFCYCAHAILPTICNSMKDRKQFSKVLLVCFVASTTIYGTVAVLGYTMFGNHLKSQITLNLPTNAISTKIAIYTTIINPFTKYPIVITPITNAIEEKWHLCKSRPVSILIRTTIVVSSVLVALFVPFFGYIMAFIGAFLSVAISLLFPCLCYLKIHKAARRFGLELIIIIGILIIATLIGIHGTYTSLVKIANSMKS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02277 409 PANTHER AMINO ACID TRANSPORTER 14 389 - -
Trre15g02277 409 Pfam Transmembrane amino acid transporter protein 19 372 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02277 Trre-Chr15 18741753 18744139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02277 1 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.366 3.71e-132 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02277 K15015 - gmx:100812006 575.859