Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02270 ATGGAAGTCGGTGATGGAAACAGAGAGCATGTCATTGATGGGATTGAAGAGCACGTTTGCAATGAAAATGCTGACAATGATTCATGTGCCGTTGACTTAGAGGTTGATGGTAAAGAACCATATGTTGGAATGGAATTTGGTTCACAAGAAAATGCTTATTCATTCTATAGTGATTATGCAAAAGTTGTCGGGTTTGGAATATCAACTAAACATAGTCGTCGATCAAAAGTTTCGAAACAGTTTATCGATGTGACTTATGCTTGCACAAGATATGGGAAGAAGCGGGAATCCATTGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTAGCTTCCGTATAAAAAGAAATTGTGATGGAAACTGGATTGTTCATAATTTCATTAAAGACCATAATCATGAACTTTTTCCAGCATATGCACATTATTTTCCTTGTCACAGAGGAATCAATAAAGCTCAAAAGCATTATATTGAAACTTTGCAACATGCTGGAGTGAGAACAAGCCAAATTTATGATGCAATGGCCAAACAACATGGAGGATATGAAAACATTGAATTGCTTGAGGAAGGATCATTAAGTTTTGAGAGCTACGATTTTGCATGTCATGCACTTGAAGAGGCCCTAAAACAATGTGTAACTATCAATCAATCTTTGAAAATAGACAAGGAAAAAGTTAGTCATAACAATTTACATGAGAAGCCACTACGTGATCCTCAAGAAAAAAAAACAAAAGGTGCTCCAAGAAGAATGAAGAGTGGAATAGAGAAAGGTCGTAAAAGAACATCTAATGATAAATTAAAAAAGGTAAATCAAGAGGGTTCAAGGAGTTAA 837 0.3608 MEVGDGNREHVIDGIEEHVCNENADNDSCAVDLEVDGKEPYVGMEFGSQENAYSFYSDYAKVVGFGISTKHSRRSKVSKQFIDVTYACTRYGKKRESIAQNPRPCLKVECEASFRIKRNCDGNWIVHNFIKDHNHELFPAYAHYFPCHRGINKAQKHYIETLQHAGVRTSQIYDAMAKQHGGYENIELLEEGSLSFESYDFACHALEEALKQCVTINQSLKIDKEKVSHNNLHEKPLRDPQEKKTKGAPRRMKSGIEKGRKRTSNDKLKKVNQEGSRS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02270 278 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 217 - -
Trre15g02270 278 MobiDBLite consensus disorder prediction 227 278 - -
Trre15g02270 278 Pfam FAR1 DNA-binding domain 54 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02270 Trre-Chr15 18671749 18672912 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre15g02270 FAR1 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02270 - - tpra:123906403 337.035