Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02267 ATGGAAATCAACATTACATCAATAGAAACAATTAAACCATCATCTCCCACAACCGAAGAACACAAAACCTACAAACTATGTTTATTTGATGTGTTTCAACTAAACACATATTTTCCATTAATCCTATTTTATCACAAAACCAATGAAATGCAAAAAATTTCAAATGTCTCAACTCAACTAAAGAATTCACTATCCAAGGCACTAACAATTTTCTACCCTCTATGTGGTAGAAGAAGTGATATCTTCTCAATCGATTGCAACGACGAAGGCGCGATTTACATGGAAGCTTCAATAAACATGGAAATGGAAGAGTTCTTAAGTCCACCAAAATTGGAATTAATAAACAAATTGCTTCCTTGTGAGCCAAACAAGACACAACCTTACAATGAAATCTTACCACAAATTTTAGTCCAAGTGAACATTTTCAAGTGTGGTGGGATAGCTATTGGTTTGTGCAATCTCCATACACTATTAGATGCATATTCTTGTAGTCTATTCTTGAAAACATGGTCTTCTATTTGTAAAGGGTCAAATGATGAAATTTGTGAGCCAAATTTCACAATTGCTTCTTTAACTTTCCCTCCAAGAAACACCTTTGGTGTTAGGGCTGGTGTGATGAATATTAACAAAGGATTAGAGATAGAAGTCAAGTGCTCTACAAGAAGATTCTTGTTTGATAACAAATCAATTAATGACTTGAAAATTGCGTCGACAAAAAACGATGGAATCAACACAAAGTTACCAACAAGTTACAAAGTGGTTACTTCATTTATATGTAAGCACATGATTGTAGCATGCATGAAAGAATTTTATGATGAAAGCAAGAGGCCATTAGTAGTTTTACATGTTGTAGACATGAGGAGAAGGATGGGAGAGAGTTTGTTACAAAATTCTATTGGAAATTTAATATGGCCAGCATTGATGGTTTGTGAAAATGTCAACAAGGACACTAATATTAGTGATATGGTTAAAATTTTGGAAGATGAAATTGGAAAGGTTAATGAAGAATTGTTTTTAAAATTGAAAAATGATCCTAGATTTTTATGGAGTGATGAGTGTGCTGAATTAATGCTTGAAGGTATGGAAAATGAAAATCCAATATCTTTTGTGTTTACAAGTTGGGGAAATATGGGATTCAAAGAGATTGATTTTGGTTGGGGAAAGCCTTTATGGATAGCTCAAAGAGGTGGTACCAAAGAAACTATTCCAAATACAATTGTGTTGATGGAAACATATGAGGGAATTGAGGCATGGGTGACAATGGCTGATAAGCATTTAGATGACTTGGAAAATGATACTGAATTCCTCAAATTTGCCTTGCTTAATCCTAATATTAATTTCAATTGTGTAATTGATTAA 1359 0.3326 MEINITSIETIKPSSPTTEEHKTYKLCLFDVFQLNTYFPLILFYHKTNEMQKISNVSTQLKNSLSKALTIFYPLCGRRSDIFSIDCNDEGAIYMEASINMEMEEFLSPPKLELINKLLPCEPNKTQPYNEILPQILVQVNIFKCGGIAIGLCNLHTLLDAYSCSLFLKTWSSICKGSNDEICEPNFTIASLTFPPRNTFGVRAGVMNINKGLEIEVKCSTRRFLFDNKSINDLKIASTKNDGINTKLPTSYKVVTSFICKHMIVACMKEFYDESKRPLVVLHVVDMRRRMGESLLQNSIGNLIWPALMVCENVNKDTNISDMVKILEDEIGKVNEELFLKLKNDPRFLWSDECAELMLEGMENENPISFVFTSWGNMGFKEIDFGWGKPLWIAQRGGTKETIPNTIVLMETYEGIEAWVTMADKHLDDLENDTEFLKFALLNPNINFNCVID 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02267 452 Gene3D - 1 203 IPR023213 -
Trre15g02267 452 Gene3D - 216 438 IPR023213 -
Trre15g02267 452 Pfam Transferase family 1 435 - -
Trre15g02267 452 PANTHER F21J9.9 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02267 Trre-Chr15 18657368 18658726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02267 1 396 Monolignol Biosynthesis Gene Families AT5G48930 23.278 6.65e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02267 - - gmx:102667966 643.654