Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02198 ATGTCATCACTAACAATGTTGGAAGTTGAACATAATCACCTCTCAGGCATAATTCAATCAAATATGGGATACAACCTTCCTAACTTGCAATATCTACACTTGAACCACAACAATTTTGTTGGTAATATTCCAAATACAATATTCAATTCTTCTAAGCTCATTCAATTTGAATTGGAGAACAATGCATTCAATGGAACTTTGCCTAATAATGCTTTTGGAAATTTAAGGTTCCTCGAATCAATTATCATATACAACAACAATTTGACAATAGATGATTCTCGTCAATTTTTTACTTCCTTGTCAAATTGTAGATATTTGAAATATATAGATATATCAGGGAGTCATATAGTTTCAGGTCTTCCTAAGTCTATCGGAAACATATCTTCACAATTCTTTAGGGCAGATTCATGTGGAATTGTTGGTAATATTCCCTTAGAAGTTGGTAACATGAGTAACTTGCAATTTTTATCACTATCCATGAATGATATAAGTGGACCAATACCTGGTACATTCAAAGGGTTACAAAAACTTCAGGGATTGTTCCTTAGCAACAATAGACTACAAGGATCATTTATTGAGGAGCTTTGTGAAACTAAGAGATTGGAAGAGTTGTATCTTGACAATAATAAGATTTCTGGAGTTTTACCAACATGTTTGGGAAATTTGAGTTATCTTAGAAAGCTATACATAGGATCTAACAATTTAAACTCTATGATACCTTCCTCTCTTTGGAGTCTCACAGATATCTTAGAGATAGATTTGTCCTCTAATAGTTTCATTGGTAATATTCCACTTGAGATTGGAAATTTGAGAGCAATTATATCATTAAATCTATCAAGAAACCAAATTTCAAGCAACATTCCTCCCACAATCAGTTTCTTAAAAACTTTGCAGAATCTATCCTTAGCACATAACAAAGTCAATGGATCAATTCCCGCATCACTTGGTGACATGGTAAGTTTGATCTCCTTGGACTTATCCCAAAATATGTTAACTGGTGTTATTCCTAAATCTTTAGAATCACTCATCCAACTTCAAAACATCAATTTCTCATATAATAGATTACAAGGAGAGATTCCGGATGGTGGAATTTTAAAAAATTTCACGGCTAAATCTTTTATGCATAATGAAGCACTTTGTGGCAATCGTTGCCTACATGTACCTCTGTGTGATAATAATCAAGTTAAGAAAAGTTCAATGGAAAATAAGTTGTTACTCAAATGCATAATTCCCATAGTTGTGTCAACCATTTTGAATGTTGCAAGCATCATAATTTTGAAAGTTAAGAAAAGGAAAAAGGTTGCAAATACTCTTGAAAGGGGTTTATCAACATTAGGAGCTCCAAGAAGAATTTCTTATTATGAACTTGTGCAAGCAACTAACGGATTCAATGAGAGTAACTTACTTGGAAAAGGGGGATTTGGCTCTGTGTATCAGGGGAAGCTTCCCGATGGTGAGATGATAGCAGTTAAAGTAATTGATTTGCAATCAGATGTAAAATCAAAAAGCTTTGATACAGAATGCAATGCAATGAAAAATCTTCGACATCGAAATTTGGTTAAAATTATCAGTGGTTGTTCGAATCTTGATTTCAAAGCACTGGTGATGGAGTTCATGCCAAATGGAAGTGTGGACAAATGGTTATATTCACATAACTATTGTTTAAATTTCTTACAAAGGTTAAACATAATGATAGATGTTGCCTCTGCATTGGAATATCTTCATCATGGCTCTTCGGTTCTAGTGGCTCATTGTGATCTAAAGCCTACCAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTGATGGATGAAGGACAGTCTAAAACACATACTCAGACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAGGGGATTGTTTCGGCCAAAGGAGACGTGTTCAGCTATGGCATTATGCTAATGGAAATCTTCACAAGAAGAAAACCGACAGATGATATGTTTGGTGCAGAACTAAGTTTGAAAACATGGATCAGTCAATCATTGCCTAATTCAATTATGGAGGTCCTGGATTCTAATTTAGTCCAACAATATGGGGGACAAATTGATGACATATTGACTTACATGTCATCTGTTTTTGATTTAGCTCTGAACTGTTGCGAAGATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTACGTCGCTAATAAAAATCAATACTTTGGTTGTTGGCGCAAATAGGGCGTAG 2247 0.3462 MSSLTMLEVEHNHLSGIIQSNMGYNLPNLQYLHLNHNNFVGNIPNTIFNSSKLIQFELENNAFNGTLPNNAFGNLRFLESIIIYNNNLTIDDSRQFFTSLSNCRYLKYIDISGSHIVSGLPKSIGNISSQFFRADSCGIVGNIPLEVGNMSNLQFLSLSMNDISGPIPGTFKGLQKLQGLFLSNNRLQGSFIEELCETKRLEELYLDNNKISGVLPTCLGNLSYLRKLYIGSNNLNSMIPSSLWSLTDILEIDLSSNSFIGNIPLEIGNLRAIISLNLSRNQISSNIPPTISFLKTLQNLSLAHNKVNGSIPASLGDMVSLISLDLSQNMLTGVIPKSLESLIQLQNINFSYNRLQGEIPDGGILKNFTAKSFMHNEALCGNRCLHVPLCDNNQVKKSSMENKLLLKCIIPIVVSTILNVASIIILKVKKRKKVANTLERGLSTLGAPRRISYYELVQATNGFNESNLLGKGGFGSVYQGKLPDGEMIAVKVIDLQSDVKSKSFDTECNAMKNLRHRNLVKIISGCSNLDFKALVMEFMPNGSVDKWLYSHNYCLNFLQRLNIMIDVASALEYLHHGSSVLVAHCDLKPTNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSAKGDVFSYGIMLMEIFTRRKPTDDMFGAELSLKTWISQSLPNSIMEVLDSNLVQQYGGQIDDILTYMSSVFDLALNCCEDSPEARINMADVTTSLIKINTLVVGANRA 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02198 748 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 539 747 - -
Trre15g02198 748 SUPERFAMILY RNI-like 7 360 - -
Trre15g02198 748 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 99 394 - -
Trre15g02198 748 Gene3D Phosphorylase Kinase; domain 1 446 538 - -
Trre15g02198 748 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Trre15g02198 748 Pfam Leucine rich repeat 200 258 IPR001611 GO:0005515
Trre15g02198 748 SMART serkin_6 463 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02198 748 PANTHER OS04G0122200 PROTEIN 1 737 - -
Trre15g02198 748 FunFam Serine-threonine protein kinase plant-type 444 538 - -
Trre15g02198 748 Gene3D Ribonuclease Inhibitor 1 399 IPR032675 -
Trre15g02198 748 Pfam Protein kinase domain 464 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02198 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Trre15g02198 748 SMART LRR_typ_2 270 294 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 200 221 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 222 246 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 150 173 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 174 199 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 1 25 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 26 50 IPR003591 -
Trre15g02198 748 SMART LRR_typ_2 318 341 IPR003591 -
Trre15g02198 748 Gene3D Transferase(Phosphotransferase) domain 1 539 743 - -
Trre15g02198 748 SUPERFAMILY Protein kinase-like (PK-like) 444 735 IPR011009 -
Trre15g02198 748 ProSiteProfiles Protein kinase domain profile. 463 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02198 748 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02198 Trre-Chr15 17936987 17939644 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02198 1 748 Receptor kinase-like Gene Family AT3G47570 38.796 7.24e-167 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02198 Pkinase 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02198 - K13420 mtr:25502863 1106.66