Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02190 ATGGACGAAGGACAATCTGAAACACATACAGAGACATTAGCTACTATTGGATACCTTGCACCAGAGTATGGAACTAGTGGAATAGTTTCTGTCAAAGGAGATGTGTACAGCTATGGAATTATGCTAATGGAAATCTTCACAAGAAAAAAACCAGCAGATGATATGTTTGTTGCAGAGCTAAGTTTGAAAACATGGATCAGTGGATCATTGCCTAATTCTATTATTAAGGTCTTGGATTCAAATTTAGTCCAACAATATGGGGAGCAAATTGATGACATAGTTACATACATGTCAACTATTTTTGGTTTAGCCCTTAATTGTTGTGAATATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTGCTACCCTAATCAAACTCAAGAATTTGGCTCTTAGCAAAAACATGGTCTAG 417 0.3597 MDEGQSETHTETLATIGYLAPEYGTSGIVSVKGDVYSYGIMLMEIFTRKKPADDMFVAELSLKTWISGSLPNSIIKVLDSNLVQQYGEQIDDIVTYMSTIFGLALNCCEYSPEARINMADVTATLIKLKNLALSKNMV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02190 138 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Trre15g02190 138 Pfam Protein tyrosine and serine/threonine kinase 5 124 IPR001245 GO:0004672|GO:0006468
Trre15g02190 138 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02190 138 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 125 - -
Trre15g02190 138 SUPERFAMILY Protein kinase-like (PK-like) 6 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02190 Trre-Chr15 17856128 17856715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02190 14 129 Receptor kinase-like Gene Family AT3G47570 36.752 5.54e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02190 PK_Tyr_Ser-Thr 2.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02190 - K13420 mtr:25502843 225.328