Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02186 ATGATTGCTTGTTATCCATTATCAGGTCCGATACCGGCAGAGATTGGAAATCTTAATCAACTTGAGCTTCTAGTATTGGCAAATAATACATTTAATGGATCTTTTCCATCCAAACTGCTCAACATGTCATCACTGATAGGTTTGTATCTTGAACTAAATGACCTCTCAGGCATAATTCAATCAAATAGGGGATATAGCCTTCCTAACTTGCAATATCTACACTTGAACCAAAACAATTTTGTTGGTAATATTCCAAATACAATATTCAATTCTTCTAAGCTCATTCAATTACAATTGCATTACAATGCATTCAATGGAACTCTGCCCAATGAAGCTTTTGGAAATTTAAGGCTCCTTGAAATATTTATGATATATTACAACAATTTTAGAATAGATGATTCTCTTCAATTTTTTACCTCCTTGTCAAATTGTAGATATTTAAAATATCTACAAATATCAGGGAATAATAATATACTATCCAGTCTTCCTAAATCAATTGGAAACATATCTTTAGCAAGTTTTGTGGCAGATTCATGTGGAATTGTTGGTAATATTCCCTTAGAAGTTGGAAACATGAGTGAATTGTTAATTTTTTCTCTAGATGATAATAATTTAAATGGACCAATACCTGGTACATTCAAAGGGTTACAAACATTACAGGGATTGTCCCTTAGCAACAATAGACTACAAGGATCATTTATTGCGGAGCTTTGTGAAACTAAGAGATTGGAAGAGTTGTATCTTGATAATAATAAGCTTTCTGGAGTTTTACCAACATGTTTGGGTAATATGACCTCTCTTAAAAAGTTACACATAGCATCTAATAGTTTGAACTCTAGATTACCTTCCTCTCTTTGGAGTCTTAAAGATATATTAGAAGTAAATTTGTCCTCTAATGCATTAATTGGTAATCTTCCACCTGAGATTGAGAATTTGAGAGCAATTACACTTTTGGATCTATCTAGAAATCAAATTTCAGGAAACATTCCTGCAACGATCAGTTCCTTAAACAATTTGCAGAATCTTTCCTTAGCACATAACAAACTGATGGGATCAATTCCTAAATCACTTGATCAAATGGTAAGCTTGATGTTCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATACCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGCTGGAGTTTTCAAAAATTTCACAGCCCAATCTTTTATGCATAATGAAGCACTCTGTGGTAATCCTCGCCTTCAAGTACCTTTGTGCCATAATCAGGTTAAGAAAAGTTCAACGAAAACAAAGTTGTTGCTCAAATGCATAATTCCCATAGTTGTGTCAACTATTTTGATTGTTGCAAGCATCATAATTTTGATAGTTAAGAAAAGGAAAAAGGTTGAAAATATTCTTGAAAGGGGTTTGTCACCTTTAGGTGCTGCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAAGGGGGGATTTGGCTCTGTGTATGAGGGGAAGCTTCCTGATGGTGAGATGATTGCGGTTAAAGTAATTGATTTGCAATCAGATGTAAAATCGAAAAGCTTTGATATAGAATGCAATGCAATGAAAAATCTTCGACATCGAAATTTGGTTAAGATTATTAGTGGTTGTTCGAATCTCGATTTCAAAGCACTGGTGCTGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCAAATAACTGTTGTTTAAATTTCTTACAAAGATTAAATATAATGATAGATGTTGCATCAGCATTGGAATATCTGCATCATGGCTCTTCGGTTCCAGTGGTTCATTGTGATCTAAAGCCTACCAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAGTCTAAAACACATACTCAGACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAGGGGATTGTTTCGGTCAAAGGGGACGTGTTCAGCTATGGCATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGTTTGAAAACATGGATCAGTCAATCATTTCCTAATTCAATCATGGAAGTCCTGGATCCTAATTTAGTCCAACAATATGGGGAACAAATTGATGACATATTGACTTACATGTCATCTATTTTTGGTATAGCCCTGAATTGTTGCGAAGATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTGCGTCGTGTTGTGAATTCGAACCAAAAACACACCAATAA 2358 0.3456 MIACYPLSGPIPAEIGNLNQLELLVLANNTFNGSFPSKLLNMSSLIGLYLELNDLSGIIQSNRGYSLPNLQYLHLNQNNFVGNIPNTIFNSSKLIQLQLHYNAFNGTLPNEAFGNLRLLEIFMIYYNNFRIDDSLQFFTSLSNCRYLKYLQISGNNNILSSLPKSIGNISLASFVADSCGIVGNIPLEVGNMSELLIFSLDDNNLNGPIPGTFKGLQTLQGLSLSNNRLQGSFIAELCETKRLEELYLDNNKLSGVLPTCLGNMTSLKKLHIASNSLNSRLPSSLWSLKDILEVNLSSNALIGNLPPEIENLRAITLLDLSRNQISGNIPATISSLNNLQNLSLAHNKLMGSIPKSLDQMVSLMFLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDAGVFKNFTAQSFMHNEALCGNPRLQVPLCHNQVKKSSTKTKLLLKCIIPIVVSTILIVASIIILIVKKRKKVENILERGLSPLGAARRISYYELVQATNGFNESNLLGKGGFGSVYEGKLPDGEMIAVKVIDLQSDVKSKSFDIECNAMKNLRHRNLVKIISGCSNLDFKALVLEFMSNGSVDKWLYSNNCCLNFLQRLNIMIDVASALEYLHHGSSVPVVHCDLKPTNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVFSYGIMLMEIFTRRKPTDDMFVAELSLKTWISQSFPNSIMEVLDPNLVQQYGEQIDDILTYMSSIFGIALNCCEDSPEARINMADVTASCCEFEPKTHQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02186 785 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 580 784 - -
Trre15g02186 785 SUPERFAMILY L domain-like 177 425 - -
Trre15g02186 785 Pfam Leucine rich repeat 242 301 IPR001611 GO:0005515
Trre15g02186 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Trre15g02186 785 ProSiteProfiles Protein kinase domain profile. 504 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02186 785 Gene3D Ribonuclease Inhibitor 2 134 IPR032675 -
Trre15g02186 785 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 140 436 - -
Trre15g02186 785 FunFam Serine-threonine protein kinase plant-type 486 579 - -
Trre15g02186 785 Gene3D Ribonuclease Inhibitor 135 441 IPR032675 -
Trre15g02186 785 SMART serkin_6 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02186 785 PANTHER OS04G0122200 PROTEIN 7 767 - -
Trre15g02186 785 SMART LRR_typ_2 360 383 IPR003591 -
Trre15g02186 785 SMART LRR_typ_2 240 263 IPR003591 -
Trre15g02186 785 SMART LRR_typ_2 264 288 IPR003591 -
Trre15g02186 785 SMART LRR_typ_2 312 336 IPR003591 -
Trre15g02186 785 SMART LRR_typ_2 67 91 IPR003591 -
Trre15g02186 785 SMART LRR_typ_2 192 215 IPR003591 -
Trre15g02186 785 Gene3D Phosphorylase Kinase; domain 1 487 579 - -
Trre15g02186 785 Pfam Protein kinase domain 505 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02186 785 SUPERFAMILY L domain-like 7 231 - -
Trre15g02186 785 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Trre15g02186 785 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Trre15g02186 785 SUPERFAMILY Protein kinase-like (PK-like) 487 773 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02186 Trre-Chr15 17817062 17819831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02186 7 772 Receptor kinase-like Gene Family AT3G47570 38.250 3.50e-165 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02186 Pkinase 8.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02186 - K13420 mtr:25481440 1095.11